Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.59■□□□□ 0.25
UPK2O00526 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.59■□□□□ 0.25
UPK2O00526 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
UPK2O00526 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
UPK2O00526 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UPK2O00526 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
UPK2O00526 IRS3P-201ENST00000223076 1006 ntBASIC16.58■□□□□ 0.24
UPK2O00526 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.58■□□□□ 0.24
UPK2O00526 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.58■□□□□ 0.24
UPK2O00526 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.58■□□□□ 0.24
UPK2O00526 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UPK2O00526 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UPK2O00526 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
UPK2O00526 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.58■□□□□ 0.24
UPK2O00526 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
UPK2O00526 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.58■□□□□ 0.24
UPK2O00526 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
UPK2O00526 FP700111.2-201ENST00000619190 1892 ntBASIC16.58■□□□□ 0.24
UPK2O00526 AC020907.5-201ENST00000624372 1936 ntBASIC16.58■□□□□ 0.24
UPK2O00526 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
UPK2O00526 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
UPK2O00526 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
UPK2O00526 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
UPK2O00526 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UPK2O00526 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK2O00526 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
UPK2O00526 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UPK2O00526 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK2O00526 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UPK2O00526 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK2O00526 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.57■□□□□ 0.24
UPK2O00526 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK2O00526 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.57■□□□□ 0.24
UPK2O00526 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.57■□□□□ 0.24
UPK2O00526 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.57■□□□□ 0.24
UPK2O00526 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UPK2O00526 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK2O00526 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UPK2O00526 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
UPK2O00526 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.56■□□□□ 0.24
UPK2O00526 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK2O00526 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UPK2O00526 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK2O00526 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK2O00526 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
UPK2O00526 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UPK2O00526 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK2O00526 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
UPK2O00526 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
UPK2O00526 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.56■□□□□ 0.24
UPK2O00526 AC138907.5-202ENST00000569484 235 ntBASIC16.56■□□□□ 0.24
UPK2O00526 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.56■□□□□ 0.24
UPK2O00526 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UPK2O00526 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.56■□□□□ 0.24
UPK2O00526 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
UPK2O00526 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
UPK2O00526 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.56■□□□□ 0.24
UPK2O00526 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK2O00526 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK2O00526 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.56■□□□□ 0.24
UPK2O00526 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
UPK2O00526 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UPK2O00526 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK2O00526 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK2O00526 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK2O00526 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
UPK2O00526 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK2O00526 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
UPK2O00526 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.55■□□□□ 0.24
UPK2O00526 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK2O00526 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK2O00526 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.55■□□□□ 0.24
UPK2O00526 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK2O00526 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK2O00526 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK2O00526 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.55■□□□□ 0.24
UPK2O00526 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
UPK2O00526 AC005837.3-201ENST00000612163 286 ntBASIC16.55■□□□□ 0.24
UPK2O00526 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UPK2O00526 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK2O00526 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UPK2O00526 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
UPK2O00526 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
UPK2O00526 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
UPK2O00526 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK2O00526 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK2O00526 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK2O00526 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK2O00526 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
UPK2O00526 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
UPK2O00526 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UPK2O00526 KRT16P2-201ENST00000414673 1423 ntBASIC16.54■□□□□ 0.24
UPK2O00526 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.54■□□□□ 0.24
UPK2O00526 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
UPK2O00526 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.54■□□□□ 0.24
UPK2O00526 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UPK2O00526 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UPK2O00526 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.54■□□□□ 0.24
UPK2O00526 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
UPK2O00526 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms