Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 LAMC2-204ENST00000493293 4313 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
SYCE2Q6PIF2 LONP2-201ENST00000285737 8199 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
SYCE2Q6PIF2 CLIP1-201ENST00000302528 5833 ntAPPRIS P4 TSL 5 BASIC10.2□□□□□ -0.78
SYCE2Q6PIF2 AC100788.2-201ENST00000625199 2889 ntBASIC10.2□□□□□ -0.78
SYCE2Q6PIF2 CCDC126-201ENST00000307471 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 TSC22D2-201ENST00000361875 11154 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 EDNRB-201ENST00000334286 4277 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 CTCFL-207ENST00000429804 3864 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 INTS14-215ENST00000569491 1797 ntTSL 2 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 ZNF835-201ENST00000537055 3450 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 HACL1-207ENST00000451445 1734 ntTSL 2 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 CAB39L-201ENST00000347776 3361 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 PKMP2-201ENST00000412159 1677 ntBASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 ZNF197-202ENST00000344387 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 CCNB1IP1-203ENST00000398160 1613 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 SAMMSON-206ENST00000641053 1516 ntBASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 CUX1-221ENST00000622516 2990 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 PCDHGC3-202ENST00000611950 2849 ntAPPRIS ALT2 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 THRB-AS1-205ENST00000609230 1318 ntTSL 5 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 PDE6H-201ENST00000266395 747 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 RNA5SP349-201ENST00000363743 109 ntBASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 SMARCE1P5-201ENST00000412207 1225 ntBASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 AL390835.1-201ENST00000413941 901 ntTSL 5 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 AL035420.1-201ENST00000430679 458 ntTSL 5 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 Z99758.1-201ENST00000432081 368 ntTSL 3 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 RPL22P11-201ENST00000434894 385 ntBASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 AL031289.1-201ENST00000440100 471 ntTSL 3 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 AC245517.3-201ENST00000440562 250 ntBASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 AL603839.3-201ENST00000450713 605 ntTSL 3 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 MEF2C-AS1-206ENST00000511100 828 ntTSL 3 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 ST3GAL3-234ENST00000531993 786 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 AC008770.2-201ENST00000547473 542 ntAPPRIS P1 TSL 4 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 LINC02301-202ENST00000555150 428 ntTSL 3 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 AC024270.3-201ENST00000565513 396 ntTSL 3 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 FRG2KP-201ENST00000565692 971 ntTSL 3 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 LINC02191-201ENST00000568036 518 ntTSL 4 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 AC007608.3-202ENST00000570241 1109 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 AC090409.1-201ENST00000587754 735 ntTSL 5 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 AC008957.2-201ENST00000618632 396 ntTSL 5 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 AL109804.1-201ENST00000620777 562 ntTSL 5 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 AD000813.1-201ENST00000624007 832 ntBASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 AC068631.1-208ENST00000626649 667 ntTSL 5 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 ZNF544-220ENST00000627781 383 ntTSL 2 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 AC068631.1-207ENST00000630315 821 ntTSL 5 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 ZNF221-201ENST00000251269 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 OPTN-206ENST00000378764 2498 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 KDM2A-201ENST00000308783 3666 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 STK36-207ENST00000440309 4721 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 NDUFS1-209ENST00000457011 2171 ntTSL 2 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 MTMR7-208ENST00000521857 2158 ntTSL 5 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 C12orf66-202ENST00000398055 4151 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 GRIA2-211ENST00000507898 3041 ntTSL 2 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 R3HDM2-202ENST00000358907 3974 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 ADHFE1-204ENST00000415254 1956 ntTSL 5 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 C1orf27-203ENST00000419367 1900 ntTSL 2 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 NONO-215ENST00000535149 2882 ntTSL 2 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 DGKI-213ENST00000614521 2799 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 ARHGEF3-201ENST00000296315 3602 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 ENTPD7-201ENST00000370489 3550 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 BBS10-201ENST00000393262 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 AL596275.2-201ENST00000641749 1706 ntBASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 CAPN8-202ENST00000366873 2596 ntTSL 5 BASIC10.19□□□□□ -0.78
SYCE2Q6PIF2 LINC02078-201ENST00000592718 4237 ntTSL 2 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 HTR3C-201ENST00000318351 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 TFAP2A-203ENST00000379613 3317 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 CCNB1IP1-204ENST00000398163 1604 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 BHLHB9-201ENST00000361229 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 FMO6P-205ENST00000639957 1597 ntTSL 5 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 SPATS2L-206ENST00000409385 2320 ntTSL 2 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 SIAE-205ENST00000545756 2921 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 KIF2C-202ENST00000372224 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 HRH1-204ENST00000438284 2080 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 BAZ2A-211ENST00000549884 6050 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 SULF1-203ENST00000419716 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 GPD2-213ENST00000540309 1961 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 LINC00598-214ENST00000637523 1943 ntTSL 5 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 TTTY6-201ENST00000253838 491 ntTSL 2 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 TTTY6B-201ENST00000253848 491 ntTSL 3 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 OR7G3-201ENST00000305444 939 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 RPS6-202ENST00000380381 892 ntTSL 2 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 IGLV3-25-201ENST00000390305 380 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 AP002761.1-201ENST00000400985 262 ntTSL 3 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 HNRNPA1P64-201ENST00000411674 922 ntBASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 STPG3-202ENST00000412566 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 NIF3L1-206ENST00000416651 967 ntTSL 2 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 OR8B9P-201ENST00000419756 925 ntBASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 NPM1P12-201ENST00000423757 834 ntBASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 PTMAP4-201ENST00000426188 346 ntBASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 AC096915.1-201ENST00000456185 512 ntBASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 LINC02499-203ENST00000508147 455 ntTSL 3 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 AC080079.1-201ENST00000509326 1045 ntBASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 LDHAL6DP-201ENST00000513668 693 ntBASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 KRTAP9-12P-201ENST00000514388 532 ntBASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 AC008514.1-201ENST00000521965 602 ntTSL 3 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 AP000879.1-201ENST00000526174 976 ntTSL 5 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 AP003392.1-201ENST00000531087 523 ntTSL 5 BASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 AL358335.1-201ENST00000555388 1066 ntBASIC10.18□□□□□ -0.78
SYCE2Q6PIF2 KRT18P47-201ENST00000561341 977 ntBASIC10.18□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms