Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC008770.1-208ENST00000591838 430 ntTSL 5 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 AC011467.3-201ENST00000599738 429 ntTSL 5 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 AC079230.1-201ENST00000602428 1143 ntBASIC8.99□□□□□ -0.97
SNX18Q96RF0 AC016727.1-201ENST00000603652 545 ntTSL 4 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 AC132812.2-201ENST00000604003 229 ntBASIC8.99□□□□□ -0.97
SNX18Q96RF0 RPL17-224ENST00000618619 747 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 AC009133.4-201ENST00000619159 561 ntBASIC8.99□□□□□ -0.97
SNX18Q96RF0 RPS3-214ENST00000530164 1878 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 ZNF234-204ENST00000592437 2292 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 TRIM52-205ENST00000611618 3466 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 SELENOT-207ENST00000615547 3488 ntTSL 5 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 WDR91-202ENST00000423565 4500 ntTSL 5 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 IDO1-207ENST00000522495 1709 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 NASP-202ENST00000351223 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 AL138688.2-201ENST00000623873 1513 ntBASIC8.99□□□□□ -0.97
SNX18Q96RF0 CBFA2T2-206ENST00000397800 7449 ntTSL 5 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 CLEC4C-205ENST00000542353 1314 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 AC023300.3-201ENST00000623096 5025 ntBASIC8.99□□□□□ -0.97
SNX18Q96RF0 STYK1-201ENST00000075503 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 MALAT1-202ENST00000534336 8708 ntBASIC8.99□□□□□ -0.97
SNX18Q96RF0 MTHFD2P1-203ENST00000494840 2595 ntTSL 2 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 AC012640.4-201ENST00000606194 2550 ntBASIC8.99□□□□□ -0.97
SNX18Q96RF0 RNF2-202ENST00000367510 3606 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 DIAPH3-204ENST00000400320 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 BICC1-201ENST00000263103 1763 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 ZNF823-201ENST00000341191 2423 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 HIP1-204ENST00000434438 7066 ntTSL 2 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 LINC02260-201ENST00000508484 2216 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
SNX18Q96RF0 DNAH11-212ENST00000620169 13670 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
SNX18Q96RF0 OSBPL6-204ENST00000359685 7114 ntTSL 5 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 ZBTB20-203ENST00000462705 3740 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SNX18Q96RF0 CSDE1-217ENST00000534699 2667 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 MYOM2-212ENST00000523438 3328 ntTSL 2 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 SIM1-201ENST00000262901 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SNX18Q96RF0 SEC24C-202ENST00000345254 4433 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SNX18Q96RF0 ST5-237ENST00000530991 3396 ntTSL 2 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 OLFML1-203ENST00000528758 1438 ntTSL 2 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 RORB-202ENST00000396204 2996 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SNX18Q96RF0 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SNX18Q96RF0 HK1-206ENST00000448642 3868 ntTSL 5 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 GMPR2-203ENST00000399440 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SNX18Q96RF0 SPECC1-201ENST00000261503 3948 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SNX18Q96RF0 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 ZBTB14-201ENST00000357006 3528 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SNX18Q96RF0 MRPL45-203ENST00000613675 1705 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SNX18Q96RF0 MSS51-201ENST00000299432 2421 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SNX18Q96RF0 PSME3-201ENST00000293362 3144 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SNX18Q96RF0 PSENEN-201ENST00000222266 603 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SNX18Q96RF0 ENSA-202ENST00000339643 633 ntTSL 2 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 HFE-206ENST00000353147 809 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SNX18Q96RF0 ASAH2B-201ENST00000374006 632 ntTSL 3 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 IGLV1-36-201ENST00000390301 393 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 MAP3K7CL-204ENST00000399925 692 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SNX18Q96RF0 AL080276.1-201ENST00000405959 247 ntBASIC8.98□□□□□ -0.97
SNX18Q96RF0 AC093698.2-201ENST00000415505 1078 ntBASIC8.98□□□□□ -0.97
SNX18Q96RF0 AL158055.1-201ENST00000418775 586 ntTSL 3 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 FGF1-208ENST00000419524 683 ntAPPRIS P1 TSL 4 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 MTTP-202ENST00000422897 1155 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SNX18Q96RF0 RPL35P5-201ENST00000433398 370 ntBASIC8.98□□□□□ -0.97
SNX18Q96RF0 OR52P1P-201ENST00000438474 963 ntBASIC8.98□□□□□ -0.97
SNX18Q96RF0 MEMO1P1-201ENST00000452572 888 ntBASIC8.98□□□□□ -0.97
SNX18Q96RF0 AL158055.1-202ENST00000455931 406 ntTSL 3 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 AC107421.1-201ENST00000477300 404 ntBASIC8.98□□□□□ -0.97
SNX18Q96RF0 RN7SL125P-201ENST00000480790 294 ntBASIC8.98□□□□□ -0.97
SNX18Q96RF0 LINC02031-201ENST00000492416 592 ntTSL 4 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 RPL7AP57-201ENST00000497708 784 ntBASIC8.98□□□□□ -0.97
SNX18Q96RF0 MRPL27-203ENST00000503633 742 ntTSL 3 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 AP003478.1-201ENST00000504616 833 ntBASIC8.98□□□□□ -0.97
SNX18Q96RF0 AC083906.3-201ENST00000509201 466 ntTSL 3 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 CDC42P5-201ENST00000518654 553 ntBASIC8.98□□□□□ -0.97
SNX18Q96RF0 AC023078.4-201ENST00000531736 961 ntBASIC8.98□□□□□ -0.97
SNX18Q96RF0 AP002807.1-203ENST00000534517 664 ntTSL 2 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 BTNL2-205ENST00000544175 845 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
SNX18Q96RF0 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 AL121809.1-201ENST00000556389 849 ntTSL 2 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 ACAP1-209ENST00000575415 317 ntTSL 2 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 DHRS7B-208ENST00000581463 729 ntTSL 3 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 FXYD5-210ENST00000588699 927 ntTSL 5 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 FXYD5-211ENST00000590686 862 ntAPPRIS P2 TSL 3 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 AL591222.3-201ENST00000611241 756 ntBASIC8.98□□□□□ -0.97
SNX18Q96RF0 TTC28-AS1_4.1-201ENST00000619378 112 ntBASIC8.98□□□□□ -0.97
SNX18Q96RF0 AC013553.4-201ENST00000619781 622 ntBASIC8.98□□□□□ -0.97
SNX18Q96RF0 TMCO1-209ENST00000628579 477 ntTSL 5 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 BRD7P4-201ENST00000406170 1522 ntBASIC8.98□□□□□ -0.97
SNX18Q96RF0 SLC17A6-201ENST00000263160 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SNX18Q96RF0 MDH1-216ENST00000544381 1346 ntTSL 2 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 AP002490.1-201ENST00000502284 4233 ntTSL 2 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 SEC16A-204ENST00000313084 3073 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 CD302-202ENST00000429078 3803 ntTSL 2 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 ATP5A1-202ENST00000398752 5818 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SNX18Q96RF0 SLC24A5-201ENST00000341459 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
SNX18Q96RF0 ARFIP1-201ENST00000353617 3111 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 F2RL2-202ENST00000504899 1387 ntTSL 2 BASIC8.98□□□□□ -0.97
SNX18Q96RF0 GABRB3-203ENST00000400188 1900 ntTSL 2 BASIC8.97□□□□□ -0.97
SNX18Q96RF0 SERPINA9-201ENST00000298845 1423 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SNX18Q96RF0 RFFL-212ENST00000584655 4039 ntTSL 2 BASIC8.97□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms