Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA9Q9Y5H5 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA9Q9Y5H5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA9Q9Y5H5 YBX1P1-201ENST00000445822 960 ntBASIC19.93■□□□□ 0.78
PCDHA9Q9Y5H5 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDHA9Q9Y5H5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHA9Q9Y5H5 AC079140.4-201ENST00000507448 529 ntBASIC19.93■□□□□ 0.78
PCDHA9Q9Y5H5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHA9Q9Y5H5 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA9Q9Y5H5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA9Q9Y5H5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA9Q9Y5H5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA9Q9Y5H5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA9Q9Y5H5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA9Q9Y5H5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHA9Q9Y5H5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PCDHA9Q9Y5H5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.93■□□□□ 0.78
PCDHA9Q9Y5H5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHA9Q9Y5H5 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PCDHA9Q9Y5H5 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PCDHA9Q9Y5H5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 AC053503.5-201ENST00000601508 636 ntBASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHA9Q9Y5H5 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHA9Q9Y5H5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHA9Q9Y5H5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHA9Q9Y5H5 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHA9Q9Y5H5 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PCDHA9Q9Y5H5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHA9Q9Y5H5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHA9Q9Y5H5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHA9Q9Y5H5 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PCDHA9Q9Y5H5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHA9Q9Y5H5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHA9Q9Y5H5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHA9Q9Y5H5 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHA9Q9Y5H5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHA9Q9Y5H5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHA9Q9Y5H5 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHA9Q9Y5H5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHA9Q9Y5H5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PCDHA9Q9Y5H5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA9Q9Y5H5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHA9Q9Y5H5 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA9Q9Y5H5 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA9Q9Y5H5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PCDHA9Q9Y5H5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PCDHA9Q9Y5H5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA9Q9Y5H5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA9Q9Y5H5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PCDHA9Q9Y5H5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA9Q9Y5H5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA9Q9Y5H5 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA9Q9Y5H5 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHA9Q9Y5H5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PCDHA9Q9Y5H5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.9■□□□□ 0.78
PCDHA9Q9Y5H5 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHA9Q9Y5H5 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.9■□□□□ 0.78
PCDHA9Q9Y5H5 TERF1P2-201ENST00000583350 1212 ntBASIC19.9■□□□□ 0.78
PCDHA9Q9Y5H5 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA9Q9Y5H5 KRT87P-202ENST00000534226 1464 ntBASIC19.9■□□□□ 0.78
PCDHA9Q9Y5H5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA9Q9Y5H5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHA9Q9Y5H5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PCDHA9Q9Y5H5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA9Q9Y5H5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA9Q9Y5H5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA9Q9Y5H5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA9Q9Y5H5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.89■□□□□ 0.77
PCDHA9Q9Y5H5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.89■□□□□ 0.77
PCDHA9Q9Y5H5 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA9Q9Y5H5 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.89■□□□□ 0.77
PCDHA9Q9Y5H5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA9Q9Y5H5 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHA9Q9Y5H5 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA9Q9Y5H5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA9Q9Y5H5 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA9Q9Y5H5 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms