Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGA7Q9Y5G6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGA7Q9Y5G6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA7Q9Y5G6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA7Q9Y5G6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA7Q9Y5G6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA7Q9Y5G6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA7Q9Y5G6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
PCDHGA7Q9Y5G6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
PCDHGA7Q9Y5G6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA7Q9Y5G6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
PCDHGA7Q9Y5G6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHGA7Q9Y5G6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGA7Q9Y5G6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGA7Q9Y5G6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PCDHGA7Q9Y5G6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.52■□□□□ 0.88
PCDHGA7Q9Y5G6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.52■□□□□ 0.88
PCDHGA7Q9Y5G6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.52■□□□□ 0.88
PCDHGA7Q9Y5G6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHGA7Q9Y5G6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.52■□□□□ 0.88
PCDHGA7Q9Y5G6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHGA7Q9Y5G6 UBE2DNL-204ENST00000602536 740 ntBASIC20.52■□□□□ 0.88
PCDHGA7Q9Y5G6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHGA7Q9Y5G6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA7Q9Y5G6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA7Q9Y5G6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHGA7Q9Y5G6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA7Q9Y5G6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
PCDHGA7Q9Y5G6 SLC29A4P1-201ENST00000398760 971 ntBASIC20.51■□□□□ 0.87
PCDHGA7Q9Y5G6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.51■□□□□ 0.87
PCDHGA7Q9Y5G6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.51■□□□□ 0.87
PCDHGA7Q9Y5G6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.51■□□□□ 0.87
PCDHGA7Q9Y5G6 MYCNOS-205ENST00000641950 531 ntBASIC20.51■□□□□ 0.87
PCDHGA7Q9Y5G6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA7Q9Y5G6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA7Q9Y5G6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA7Q9Y5G6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA7Q9Y5G6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHGA7Q9Y5G6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA7Q9Y5G6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA7Q9Y5G6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA7Q9Y5G6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHGA7Q9Y5G6 TSPY20P-201ENST00000450910 630 ntBASIC20.5■□□□□ 0.87
PCDHGA7Q9Y5G6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.5■□□□□ 0.87
PCDHGA7Q9Y5G6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHGA7Q9Y5G6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
PCDHGA7Q9Y5G6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.5■□□□□ 0.87
PCDHGA7Q9Y5G6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHGA7Q9Y5G6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA7Q9Y5G6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA7Q9Y5G6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA7Q9Y5G6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PCDHGA7Q9Y5G6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHGA7Q9Y5G6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA7Q9Y5G6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA7Q9Y5G6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA7Q9Y5G6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA7Q9Y5G6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHGA7Q9Y5G6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA7Q9Y5G6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA7Q9Y5G6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA7Q9Y5G6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA7Q9Y5G6 AP001160.3-201ENST00000601484 763 ntBASIC20.49■□□□□ 0.87
PCDHGA7Q9Y5G6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHGA7Q9Y5G6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHGA7Q9Y5G6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA7Q9Y5G6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA7Q9Y5G6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA7Q9Y5G6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHGA7Q9Y5G6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHGA7Q9Y5G6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA7Q9Y5G6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PCDHGA7Q9Y5G6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PCDHGA7Q9Y5G6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.48■□□□□ 0.87
PCDHGA7Q9Y5G6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHGA7Q9Y5G6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA7Q9Y5G6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA7Q9Y5G6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
PCDHGA7Q9Y5G6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA7Q9Y5G6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA7Q9Y5G6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA7Q9Y5G6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PCDHGA7Q9Y5G6 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.48■□□□□ 0.87
PCDHGA7Q9Y5G6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHGA7Q9Y5G6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.48■□□□□ 0.87
PCDHGA7Q9Y5G6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA7Q9Y5G6 LINC01006-201ENST00000333319 2292 ntBASIC20.48■□□□□ 0.87
PCDHGA7Q9Y5G6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PCDHGA7Q9Y5G6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PCDHGA7Q9Y5G6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA7Q9Y5G6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA7Q9Y5G6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA7Q9Y5G6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA7Q9Y5G6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.87
PCDHGA7Q9Y5G6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA7Q9Y5G6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDHGA7Q9Y5G6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA7Q9Y5G6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA7Q9Y5G6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA7Q9Y5G6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms