Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.21■□□□□ 0.51
COMMD3Q9UBI1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD3Q9UBI1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
COMMD3Q9UBI1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COMMD3Q9UBI1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.21■□□□□ 0.51
COMMD3Q9UBI1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.21■□□□□ 0.51
COMMD3Q9UBI1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.21■□□□□ 0.51
COMMD3Q9UBI1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.21■□□□□ 0.51
COMMD3Q9UBI1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
COMMD3Q9UBI1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COMMD3Q9UBI1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
COMMD3Q9UBI1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
COMMD3Q9UBI1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
COMMD3Q9UBI1 AIRN-201ENST00000601203 4374 ntBASIC18.2■□□□□ 0.5
COMMD3Q9UBI1 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
COMMD3Q9UBI1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COMMD3Q9UBI1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
COMMD3Q9UBI1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.2■□□□□ 0.5
COMMD3Q9UBI1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COMMD3Q9UBI1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COMMD3Q9UBI1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COMMD3Q9UBI1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
COMMD3Q9UBI1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.2■□□□□ 0.5
COMMD3Q9UBI1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
COMMD3Q9UBI1 AC116562.4-201ENST00000641316 2276 ntBASIC18.2■□□□□ 0.5
COMMD3Q9UBI1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
COMMD3Q9UBI1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COMMD3Q9UBI1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COMMD3Q9UBI1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.19■□□□□ 0.5
COMMD3Q9UBI1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COMMD3Q9UBI1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
COMMD3Q9UBI1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
COMMD3Q9UBI1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COMMD3Q9UBI1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
COMMD3Q9UBI1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.18■□□□□ 0.5
COMMD3Q9UBI1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
COMMD3Q9UBI1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
COMMD3Q9UBI1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.18■□□□□ 0.5
COMMD3Q9UBI1 MIR4508-201ENST00000584178 70 ntBASIC18.18■□□□□ 0.5
COMMD3Q9UBI1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COMMD3Q9UBI1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COMMD3Q9UBI1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COMMD3Q9UBI1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COMMD3Q9UBI1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.18■□□□□ 0.5
COMMD3Q9UBI1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COMMD3Q9UBI1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COMMD3Q9UBI1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COMMD3Q9UBI1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COMMD3Q9UBI1 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.18■□□□□ 0.5
COMMD3Q9UBI1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COMMD3Q9UBI1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COMMD3Q9UBI1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COMMD3Q9UBI1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
COMMD3Q9UBI1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
COMMD3Q9UBI1 BX323043.1-201ENST00000641006 1765 ntBASIC18.17■□□□□ 0.5
COMMD3Q9UBI1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COMMD3Q9UBI1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COMMD3Q9UBI1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
COMMD3Q9UBI1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COMMD3Q9UBI1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COMMD3Q9UBI1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.17■□□□□ 0.5
COMMD3Q9UBI1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.17■□□□□ 0.5
COMMD3Q9UBI1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COMMD3Q9UBI1 AL034346.1-201ENST00000568244 1277 ntBASIC18.17■□□□□ 0.5
COMMD3Q9UBI1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.17■□□□□ 0.5
COMMD3Q9UBI1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COMMD3Q9UBI1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.17■□□□□ 0.5
COMMD3Q9UBI1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
COMMD3Q9UBI1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
COMMD3Q9UBI1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COMMD3Q9UBI1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COMMD3Q9UBI1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COMMD3Q9UBI1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COMMD3Q9UBI1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COMMD3Q9UBI1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms