Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.04■□□□□ 0.8
CUEDC1Q9NWM3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CUEDC1Q9NWM3 RBM17P2-201ENST00000616397 1405 ntBASIC20.03■□□□□ 0.8
CUEDC1Q9NWM3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CUEDC1Q9NWM3 AC245052.3-201ENST00000450182 901 ntBASIC20.03■□□□□ 0.8
CUEDC1Q9NWM3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.03■□□□□ 0.8
CUEDC1Q9NWM3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.03■□□□□ 0.8
CUEDC1Q9NWM3 BID-214ENST00000617586 542 ntTSL 5 BASIC20.03■□□□□ 0.8
CUEDC1Q9NWM3 AC010536.3-201ENST00000620306 533 ntBASIC20.03■□□□□ 0.8
CUEDC1Q9NWM3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.03■□□□□ 0.8
CUEDC1Q9NWM3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CUEDC1Q9NWM3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CUEDC1Q9NWM3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.02■□□□□ 0.8
CUEDC1Q9NWM3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CUEDC1Q9NWM3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CUEDC1Q9NWM3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
CUEDC1Q9NWM3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CUEDC1Q9NWM3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CUEDC1Q9NWM3 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.02■□□□□ 0.8
CUEDC1Q9NWM3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.02■□□□□ 0.8
CUEDC1Q9NWM3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.02■□□□□ 0.8
CUEDC1Q9NWM3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CUEDC1Q9NWM3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.02■□□□□ 0.8
CUEDC1Q9NWM3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.8
CUEDC1Q9NWM3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CUEDC1Q9NWM3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CUEDC1Q9NWM3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CUEDC1Q9NWM3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CUEDC1Q9NWM3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CUEDC1Q9NWM3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CUEDC1Q9NWM3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CUEDC1Q9NWM3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CUEDC1Q9NWM3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.01■□□□□ 0.79
CUEDC1Q9NWM3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CUEDC1Q9NWM3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CUEDC1Q9NWM3 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CUEDC1Q9NWM3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CUEDC1Q9NWM3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.01■□□□□ 0.79
CUEDC1Q9NWM3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CUEDC1Q9NWM3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CUEDC1Q9NWM3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CUEDC1Q9NWM3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CUEDC1Q9NWM3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.01■□□□□ 0.79
CUEDC1Q9NWM3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CUEDC1Q9NWM3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20■□□□□ 0.79
CUEDC1Q9NWM3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20■□□□□ 0.79
CUEDC1Q9NWM3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CUEDC1Q9NWM3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
CUEDC1Q9NWM3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20■□□□□ 0.79
CUEDC1Q9NWM3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20■□□□□ 0.79
CUEDC1Q9NWM3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20■□□□□ 0.79
CUEDC1Q9NWM3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CUEDC1Q9NWM3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20■□□□□ 0.79
CUEDC1Q9NWM3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20■□□□□ 0.79
CUEDC1Q9NWM3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CUEDC1Q9NWM3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20■□□□□ 0.79
CUEDC1Q9NWM3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20■□□□□ 0.79
CUEDC1Q9NWM3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20■□□□□ 0.79
CUEDC1Q9NWM3 AC066615.1-201ENST00000640911 628 ntBASIC20■□□□□ 0.79
CUEDC1Q9NWM3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20■□□□□ 0.79
CUEDC1Q9NWM3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20■□□□□ 0.79
CUEDC1Q9NWM3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20■□□□□ 0.79
CUEDC1Q9NWM3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CUEDC1Q9NWM3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 AL355802.2-201ENST00000402069 882 ntBASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 TERF1P5-201ENST00000477545 1207 ntBASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 DUX4L16-201ENST00000555130 1264 ntBASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 AC243732.1-201ENST00000612648 864 ntBASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 AL109923.1-201ENST00000618799 583 ntBASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.99■□□□□ 0.79
CUEDC1Q9NWM3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.98■□□□□ 0.79
CUEDC1Q9NWM3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CUEDC1Q9NWM3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CUEDC1Q9NWM3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.98■□□□□ 0.79
CUEDC1Q9NWM3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CUEDC1Q9NWM3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CUEDC1Q9NWM3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.98■□□□□ 0.79
CUEDC1Q9NWM3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CUEDC1Q9NWM3 AC006970.2-201ENST00000450065 779 ntBASIC19.98■□□□□ 0.79
CUEDC1Q9NWM3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms