Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.45■□□□□ 0.7
ZCCHC3Q9NUD5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ZCCHC3Q9NUD5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.45■□□□□ 0.7
ZCCHC3Q9NUD5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.45■□□□□ 0.7
ZCCHC3Q9NUD5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZCCHC3Q9NUD5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.45■□□□□ 0.7
ZCCHC3Q9NUD5 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.45■□□□□ 0.7
ZCCHC3Q9NUD5 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.45■□□□□ 0.7
ZCCHC3Q9NUD5 DUX4L2-201ENST00000561772 1275 ntBASIC19.45■□□□□ 0.7
ZCCHC3Q9NUD5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.45■□□□□ 0.7
ZCCHC3Q9NUD5 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZCCHC3Q9NUD5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
ZCCHC3Q9NUD5 DUX4L6-201ENST00000626483 1275 ntBASIC19.45■□□□□ 0.7
ZCCHC3Q9NUD5 DUX4L1-201ENST00000627662 1275 ntBASIC19.45■□□□□ 0.7
ZCCHC3Q9NUD5 DUX4L8-201ENST00000629013 1275 ntBASIC19.45■□□□□ 0.7
ZCCHC3Q9NUD5 DUX4L3-201ENST00000630187 1275 ntBASIC19.45■□□□□ 0.7
ZCCHC3Q9NUD5 DUX4L7-201ENST00000630678 1275 ntBASIC19.45■□□□□ 0.7
ZCCHC3Q9NUD5 DUX4L5-201ENST00000630834 1275 ntBASIC19.45■□□□□ 0.7
ZCCHC3Q9NUD5 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.45■□□□□ 0.7
ZCCHC3Q9NUD5 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZCCHC3Q9NUD5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZCCHC3Q9NUD5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ZCCHC3Q9NUD5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZCCHC3Q9NUD5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.45■□□□□ 0.7
ZCCHC3Q9NUD5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 KRT16P2-201ENST00000414673 1423 ntBASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC3Q9NUD5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZCCHC3Q9NUD5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
ZCCHC3Q9NUD5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ZCCHC3Q9NUD5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ZCCHC3Q9NUD5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.43■□□□□ 0.7
ZCCHC3Q9NUD5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZCCHC3Q9NUD5 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZCCHC3Q9NUD5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZCCHC3Q9NUD5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZCCHC3Q9NUD5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZCCHC3Q9NUD5 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZCCHC3Q9NUD5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZCCHC3Q9NUD5 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.43■□□□□ 0.7
ZCCHC3Q9NUD5 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.43■□□□□ 0.7
ZCCHC3Q9NUD5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.43■□□□□ 0.7
ZCCHC3Q9NUD5 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.43■□□□□ 0.7
ZCCHC3Q9NUD5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZCCHC3Q9NUD5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZCCHC3Q9NUD5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ZCCHC3Q9NUD5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.43■□□□□ 0.7
ZCCHC3Q9NUD5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZCCHC3Q9NUD5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.42■□□□□ 0.7
ZCCHC3Q9NUD5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZCCHC3Q9NUD5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZCCHC3Q9NUD5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
ZCCHC3Q9NUD5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.42■□□□□ 0.7
ZCCHC3Q9NUD5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZCCHC3Q9NUD5 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZCCHC3Q9NUD5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ZCCHC3Q9NUD5 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZCCHC3Q9NUD5 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.42■□□□□ 0.7
ZCCHC3Q9NUD5 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZCCHC3Q9NUD5 AP001160.3-201ENST00000601484 763 ntBASIC19.42■□□□□ 0.7
ZCCHC3Q9NUD5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ZCCHC3Q9NUD5 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZCCHC3Q9NUD5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ZCCHC3Q9NUD5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZCCHC3Q9NUD5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZCCHC3Q9NUD5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.42■□□□□ 0.7
ZCCHC3Q9NUD5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZCCHC3Q9NUD5 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZCCHC3Q9NUD5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.41■□□□□ 0.7
ZCCHC3Q9NUD5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZCCHC3Q9NUD5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZCCHC3Q9NUD5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
ZCCHC3Q9NUD5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZCCHC3Q9NUD5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZCCHC3Q9NUD5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZCCHC3Q9NUD5 AC245052.3-201ENST00000450182 901 ntBASIC19.41■□□□□ 0.7
ZCCHC3Q9NUD5 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZCCHC3Q9NUD5 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms