Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLE3Q9NRF9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.21■□□□□ 0.67
POLE3Q9NRF9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
POLE3Q9NRF9 AP001160.3-201ENST00000601484 763 ntBASIC19.21■□□□□ 0.67
POLE3Q9NRF9 AC104187.1-201ENST00000607510 612 ntBASIC19.21■□□□□ 0.67
POLE3Q9NRF9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
POLE3Q9NRF9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
POLE3Q9NRF9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
POLE3Q9NRF9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
POLE3Q9NRF9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
POLE3Q9NRF9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 AC245052.3-201ENST00000450182 901 ntBASIC19.2■□□□□ 0.66
POLE3Q9NRF9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.2■□□□□ 0.66
POLE3Q9NRF9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLE3Q9NRF9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.2■□□□□ 0.66
POLE3Q9NRF9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLE3Q9NRF9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.19■□□□□ 0.66
POLE3Q9NRF9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.19■□□□□ 0.66
POLE3Q9NRF9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
POLE3Q9NRF9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
POLE3Q9NRF9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLE3Q9NRF9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
POLE3Q9NRF9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.19■□□□□ 0.66
POLE3Q9NRF9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.19■□□□□ 0.66
POLE3Q9NRF9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLE3Q9NRF9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLE3Q9NRF9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
POLE3Q9NRF9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLE3Q9NRF9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.19■□□□□ 0.66
POLE3Q9NRF9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
POLE3Q9NRF9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLE3Q9NRF9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
POLE3Q9NRF9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
POLE3Q9NRF9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLE3Q9NRF9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLE3Q9NRF9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLE3Q9NRF9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLE3Q9NRF9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.18■□□□□ 0.66
POLE3Q9NRF9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLE3Q9NRF9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
POLE3Q9NRF9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
POLE3Q9NRF9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.18■□□□□ 0.66
POLE3Q9NRF9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.18■□□□□ 0.66
POLE3Q9NRF9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
POLE3Q9NRF9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
POLE3Q9NRF9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLE3Q9NRF9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
POLE3Q9NRF9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLE3Q9NRF9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLE3Q9NRF9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
POLE3Q9NRF9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLE3Q9NRF9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.18■□□□□ 0.66
POLE3Q9NRF9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLE3Q9NRF9 AC011484.1-201ENST00000377652 1995 ntBASIC19.17■□□□□ 0.66
POLE3Q9NRF9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
POLE3Q9NRF9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.17■□□□□ 0.66
POLE3Q9NRF9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLE3Q9NRF9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.17■□□□□ 0.66
POLE3Q9NRF9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.17■□□□□ 0.66
POLE3Q9NRF9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLE3Q9NRF9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLE3Q9NRF9 PLK5-205ENST00000642079 1969 ntBASIC19.17■□□□□ 0.66
POLE3Q9NRF9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.17■□□□□ 0.66
POLE3Q9NRF9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLE3Q9NRF9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLE3Q9NRF9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLE3Q9NRF9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
POLE3Q9NRF9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
POLE3Q9NRF9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
POLE3Q9NRF9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLE3Q9NRF9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.16■□□□□ 0.66
POLE3Q9NRF9 KRT19P1-201ENST00000405746 1186 ntBASIC19.16■□□□□ 0.66
POLE3Q9NRF9 SLC7A5P1-201ENST00000568957 537 ntBASIC19.16■□□□□ 0.66
POLE3Q9NRF9 RARRES2P11-201ENST00000635158 484 ntBASIC19.16■□□□□ 0.66
POLE3Q9NRF9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms