Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.59■■□□□ 1.05
EBF3Q9H4W6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.59■■□□□ 1.05
EBF3Q9H4W6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.59■■□□□ 1.05
EBF3Q9H4W6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
EBF3Q9H4W6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.59■■□□□ 1.05
EBF3Q9H4W6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
EBF3Q9H4W6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
EBF3Q9H4W6 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
EBF3Q9H4W6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.58■■□□□ 1.05
EBF3Q9H4W6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.58■■□□□ 1.05
EBF3Q9H4W6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
EBF3Q9H4W6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
EBF3Q9H4W6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.58■■□□□ 1.05
EBF3Q9H4W6 DUSP5P2-201ENST00000426873 1033 ntBASIC21.58■■□□□ 1.05
EBF3Q9H4W6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.58■■□□□ 1.05
EBF3Q9H4W6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.58■■□□□ 1.05
EBF3Q9H4W6 AC091874.3-201ENST00000512672 1195 ntBASIC21.58■■□□□ 1.05
EBF3Q9H4W6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.58■■□□□ 1.05
EBF3Q9H4W6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.58■■□□□ 1.05
EBF3Q9H4W6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
EBF3Q9H4W6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.58■■□□□ 1.05
EBF3Q9H4W6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
EBF3Q9H4W6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
EBF3Q9H4W6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
EBF3Q9H4W6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.58■■□□□ 1.04
EBF3Q9H4W6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
EBF3Q9H4W6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EBF3Q9H4W6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
EBF3Q9H4W6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
EBF3Q9H4W6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
EBF3Q9H4W6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
EBF3Q9H4W6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.57■■□□□ 1.04
EBF3Q9H4W6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EBF3Q9H4W6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EBF3Q9H4W6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EBF3Q9H4W6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.57■■□□□ 1.04
EBF3Q9H4W6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.57■■□□□ 1.04
EBF3Q9H4W6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
EBF3Q9H4W6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.57■■□□□ 1.04
EBF3Q9H4W6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.57■■□□□ 1.04
EBF3Q9H4W6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EBF3Q9H4W6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EBF3Q9H4W6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
EBF3Q9H4W6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
EBF3Q9H4W6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.56■■□□□ 1.04
EBF3Q9H4W6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
EBF3Q9H4W6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.56■■□□□ 1.04
EBF3Q9H4W6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
EBF3Q9H4W6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
EBF3Q9H4W6 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.56■■□□□ 1.04
EBF3Q9H4W6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.56■■□□□ 1.04
EBF3Q9H4W6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
EBF3Q9H4W6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
EBF3Q9H4W6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.56■■□□□ 1.04
EBF3Q9H4W6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
EBF3Q9H4W6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
EBF3Q9H4W6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
EBF3Q9H4W6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
EBF3Q9H4W6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
EBF3Q9H4W6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
EBF3Q9H4W6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
EBF3Q9H4W6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
EBF3Q9H4W6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
EBF3Q9H4W6 AC010542.4-201ENST00000563151 1910 ntBASIC21.55■■□□□ 1.04
EBF3Q9H4W6 PRORSD1P-201ENST00000295112 541 ntBASIC21.55■■□□□ 1.04
EBF3Q9H4W6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
EBF3Q9H4W6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
EBF3Q9H4W6 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.55■■□□□ 1.04
EBF3Q9H4W6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.55■■□□□ 1.04
EBF3Q9H4W6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
EBF3Q9H4W6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
EBF3Q9H4W6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
EBF3Q9H4W6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
EBF3Q9H4W6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
EBF3Q9H4W6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
EBF3Q9H4W6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
EBF3Q9H4W6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
EBF3Q9H4W6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
EBF3Q9H4W6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.54■■□□□ 1.04
EBF3Q9H4W6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
EBF3Q9H4W6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
EBF3Q9H4W6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
EBF3Q9H4W6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
EBF3Q9H4W6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.54■■□□□ 1.04
EBF3Q9H4W6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
EBF3Q9H4W6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.54■■□□□ 1.04
EBF3Q9H4W6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.54■■□□□ 1.04
EBF3Q9H4W6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
EBF3Q9H4W6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
EBF3Q9H4W6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.53■■□□□ 1.04
EBF3Q9H4W6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
EBF3Q9H4W6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
EBF3Q9H4W6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.53■■□□□ 1.04
EBF3Q9H4W6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
EBF3Q9H4W6 C11orf96-202ENST00000528572 1834 ntBASIC21.53■■□□□ 1.04
EBF3Q9H4W6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
EBF3Q9H4W6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
EBF3Q9H4W6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.53■■□□□ 1.04
EBF3Q9H4W6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
EBF3Q9H4W6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms