Protein–RNA interactions for Protein: Q9H1Y3

OPN3, Opsin-3, humanhuman

Predicted RBP Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN3Q9H1Y3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.31■□□□□ 0.52
OPN3Q9H1Y3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
OPN3Q9H1Y3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
OPN3Q9H1Y3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.3■□□□□ 0.52
OPN3Q9H1Y3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
OPN3Q9H1Y3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
OPN3Q9H1Y3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
OPN3Q9H1Y3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.3■□□□□ 0.52
OPN3Q9H1Y3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
OPN3Q9H1Y3 AL355472.2-201ENST00000422958 438 ntBASIC18.3■□□□□ 0.52
OPN3Q9H1Y3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.3■□□□□ 0.52
OPN3Q9H1Y3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.3■□□□□ 0.52
OPN3Q9H1Y3 RNF165-205ENST00000588679 2904 ntBASIC18.3■□□□□ 0.52
OPN3Q9H1Y3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
OPN3Q9H1Y3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
OPN3Q9H1Y3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
OPN3Q9H1Y3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.3■□□□□ 0.52
OPN3Q9H1Y3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
OPN3Q9H1Y3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.3■□□□□ 0.52
OPN3Q9H1Y3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPN3Q9H1Y3 AL117328.2-201ENST00000624617 1940 ntBASIC18.29■□□□□ 0.52
OPN3Q9H1Y3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPN3Q9H1Y3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPN3Q9H1Y3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.29■□□□□ 0.52
OPN3Q9H1Y3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPN3Q9H1Y3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
OPN3Q9H1Y3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.29■□□□□ 0.52
OPN3Q9H1Y3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.29■□□□□ 0.52
OPN3Q9H1Y3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.29■□□□□ 0.52
OPN3Q9H1Y3 RNA5SP413-201ENST00000516373 109 ntBASIC18.29■□□□□ 0.52
OPN3Q9H1Y3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPN3Q9H1Y3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.29■□□□□ 0.52
OPN3Q9H1Y3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.29■□□□□ 0.52
OPN3Q9H1Y3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.29■□□□□ 0.52
OPN3Q9H1Y3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPN3Q9H1Y3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
OPN3Q9H1Y3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPN3Q9H1Y3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
OPN3Q9H1Y3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
OPN3Q9H1Y3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.29■□□□□ 0.52
OPN3Q9H1Y3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
OPN3Q9H1Y3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
OPN3Q9H1Y3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPN3Q9H1Y3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.28■□□□□ 0.52
OPN3Q9H1Y3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
OPN3Q9H1Y3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
OPN3Q9H1Y3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.28■□□□□ 0.52
OPN3Q9H1Y3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
OPN3Q9H1Y3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.27■□□□□ 0.52
OPN3Q9H1Y3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
OPN3Q9H1Y3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
OPN3Q9H1Y3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
OPN3Q9H1Y3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
OPN3Q9H1Y3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.27■□□□□ 0.52
OPN3Q9H1Y3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
OPN3Q9H1Y3 LSM12P1-201ENST00000411836 588 ntBASIC18.27■□□□□ 0.52
OPN3Q9H1Y3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.27■□□□□ 0.52
OPN3Q9H1Y3 AC007322.3-201ENST00000426526 701 ntBASIC18.27■□□□□ 0.52
OPN3Q9H1Y3 DUSP5P2-201ENST00000426873 1033 ntBASIC18.27■□□□□ 0.52
OPN3Q9H1Y3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
OPN3Q9H1Y3 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.27■□□□□ 0.52
OPN3Q9H1Y3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.27■□□□□ 0.52
OPN3Q9H1Y3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.27■□□□□ 0.52
OPN3Q9H1Y3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.27■□□□□ 0.52
OPN3Q9H1Y3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.27■□□□□ 0.52
OPN3Q9H1Y3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
OPN3Q9H1Y3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.27■□□□□ 0.52
OPN3Q9H1Y3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
OPN3Q9H1Y3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
OPN3Q9H1Y3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
OPN3Q9H1Y3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
OPN3Q9H1Y3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
OPN3Q9H1Y3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
OPN3Q9H1Y3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
OPN3Q9H1Y3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
OPN3Q9H1Y3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPN3Q9H1Y3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPN3Q9H1Y3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.26■□□□□ 0.51
OPN3Q9H1Y3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
OPN3Q9H1Y3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.26■□□□□ 0.51
OPN3Q9H1Y3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
OPN3Q9H1Y3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPN3Q9H1Y3 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.26■□□□□ 0.51
OPN3Q9H1Y3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
OPN3Q9H1Y3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.26■□□□□ 0.51
OPN3Q9H1Y3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.26■□□□□ 0.51
OPN3Q9H1Y3 AC097658.1-201ENST00000475555 843 ntBASIC18.26■□□□□ 0.51
OPN3Q9H1Y3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.26■□□□□ 0.51
OPN3Q9H1Y3 AC091874.3-201ENST00000512672 1195 ntBASIC18.26■□□□□ 0.51
OPN3Q9H1Y3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
OPN3Q9H1Y3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
OPN3Q9H1Y3 AC083880.1-201ENST00000608266 535 ntBASIC18.26■□□□□ 0.51
OPN3Q9H1Y3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPN3Q9H1Y3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.26■□□□□ 0.51
OPN3Q9H1Y3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
OPN3Q9H1Y3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
OPN3Q9H1Y3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
OPN3Q9H1Y3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPN3Q9H1Y3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.25■□□□□ 0.51
OPN3Q9H1Y3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms