Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB40CQ96S21 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
RAB40CQ96S21 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RAB40CQ96S21 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB40CQ96S21 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RAB40CQ96S21 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB40CQ96S21 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40CQ96S21 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB40CQ96S21 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40CQ96S21 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RAB40CQ96S21 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB40CQ96S21 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40CQ96S21 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40CQ96S21 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB40CQ96S21 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RAB40CQ96S21 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB40CQ96S21 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB40CQ96S21 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB40CQ96S21 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RAB40CQ96S21 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB40CQ96S21 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB40CQ96S21 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.77■□□□□ 0.28
RAB40CQ96S21 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB40CQ96S21 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC16.77■□□□□ 0.28
RAB40CQ96S21 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.77■□□□□ 0.28
RAB40CQ96S21 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.77■□□□□ 0.28
RAB40CQ96S21 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.77■□□□□ 0.27
RAB40CQ96S21 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.77■□□□□ 0.27
RAB40CQ96S21 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB40CQ96S21 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB40CQ96S21 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB40CQ96S21 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.77■□□□□ 0.27
RAB40CQ96S21 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB40CQ96S21 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
RAB40CQ96S21 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40CQ96S21 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB40CQ96S21 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB40CQ96S21 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB40CQ96S21 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB40CQ96S21 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB40CQ96S21 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40CQ96S21 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40CQ96S21 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB40CQ96S21 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB40CQ96S21 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40CQ96S21 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40CQ96S21 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40CQ96S21 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40CQ96S21 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40CQ96S21 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40CQ96S21 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RAB40CQ96S21 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40CQ96S21 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40CQ96S21 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40CQ96S21 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40CQ96S21 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40CQ96S21 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
RAB40CQ96S21 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40CQ96S21 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40CQ96S21 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.75■□□□□ 0.27
RAB40CQ96S21 AC092171.4-201ENST00000609130 632 ntBASIC16.75■□□□□ 0.27
RAB40CQ96S21 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40CQ96S21 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40CQ96S21 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40CQ96S21 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40CQ96S21 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40CQ96S21 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RAB40CQ96S21 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40CQ96S21 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40CQ96S21 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB40CQ96S21 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40CQ96S21 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40CQ96S21 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40CQ96S21 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40CQ96S21 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40CQ96S21 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40CQ96S21 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40CQ96S21 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40CQ96S21 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB40CQ96S21 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB40CQ96S21 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC16.74■□□□□ 0.27
RAB40CQ96S21 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.74■□□□□ 0.27
RAB40CQ96S21 AC010525.1-201ENST00000585559 441 ntBASIC16.74■□□□□ 0.27
RAB40CQ96S21 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.74■□□□□ 0.27
RAB40CQ96S21 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
RAB40CQ96S21 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40CQ96S21 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40CQ96S21 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40CQ96S21 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40CQ96S21 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB40CQ96S21 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RAB40CQ96S21 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB40CQ96S21 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.74■□□□□ 0.27
RAB40CQ96S21 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40CQ96S21 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40CQ96S21 AL512408.1-201ENST00000569378 2000 ntBASIC16.74■□□□□ 0.27
RAB40CQ96S21 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB40CQ96S21 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RAB40CQ96S21 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40CQ96S21 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms