Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
GAFA1Q96PS6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.27■□□□□ 0.36
GAFA1Q96PS6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
GAFA1Q96PS6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
GAFA1Q96PS6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
GAFA1Q96PS6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
GAFA1Q96PS6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
GAFA1Q96PS6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GAFA1Q96PS6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.26■□□□□ 0.35
GAFA1Q96PS6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GAFA1Q96PS6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GAFA1Q96PS6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.26■□□□□ 0.35
GAFA1Q96PS6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GAFA1Q96PS6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.26■□□□□ 0.35
GAFA1Q96PS6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.26■□□□□ 0.35
GAFA1Q96PS6 AC007322.4-201ENST00000509611 723 ntBASIC17.26■□□□□ 0.35
GAFA1Q96PS6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.26■□□□□ 0.35
GAFA1Q96PS6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.26■□□□□ 0.35
GAFA1Q96PS6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GAFA1Q96PS6 AC080038.1-201ENST00000611274 1154 ntBASIC17.26■□□□□ 0.35
GAFA1Q96PS6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
GAFA1Q96PS6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.26■□□□□ 0.35
GAFA1Q96PS6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
GAFA1Q96PS6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
GAFA1Q96PS6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GAFA1Q96PS6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.25■□□□□ 0.35
GAFA1Q96PS6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
GAFA1Q96PS6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GAFA1Q96PS6 AC121338.2-201ENST00000622535 1744 ntBASIC17.25■□□□□ 0.35
GAFA1Q96PS6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GAFA1Q96PS6 CNN2P6-201ENST00000439038 900 ntBASIC17.25■□□□□ 0.35
GAFA1Q96PS6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.25■□□□□ 0.35
GAFA1Q96PS6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GAFA1Q96PS6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GAFA1Q96PS6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
GAFA1Q96PS6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
GAFA1Q96PS6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.25■□□□□ 0.35
GAFA1Q96PS6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
GAFA1Q96PS6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GAFA1Q96PS6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GAFA1Q96PS6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GAFA1Q96PS6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.24■□□□□ 0.35
GAFA1Q96PS6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.24■□□□□ 0.35
GAFA1Q96PS6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.24■□□□□ 0.35
GAFA1Q96PS6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.24■□□□□ 0.35
GAFA1Q96PS6 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.24■□□□□ 0.35
GAFA1Q96PS6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.24■□□□□ 0.35
GAFA1Q96PS6 AC231657.2-201ENST00000624556 255 ntBASIC17.24■□□□□ 0.35
GAFA1Q96PS6 AC073111.5-205ENST00000641717 521 ntBASIC17.24■□□□□ 0.35
GAFA1Q96PS6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GAFA1Q96PS6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
GAFA1Q96PS6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GAFA1Q96PS6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GAFA1Q96PS6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
GAFA1Q96PS6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.24■□□□□ 0.35
GAFA1Q96PS6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
GAFA1Q96PS6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.23■□□□□ 0.35
GAFA1Q96PS6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
GAFA1Q96PS6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.23■□□□□ 0.35
GAFA1Q96PS6 AC116050.2-201ENST00000612102 1779 ntBASIC17.23■□□□□ 0.35
GAFA1Q96PS6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GAFA1Q96PS6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
GAFA1Q96PS6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
GAFA1Q96PS6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
GAFA1Q96PS6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
GAFA1Q96PS6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GAFA1Q96PS6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
GAFA1Q96PS6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.23■□□□□ 0.35
GAFA1Q96PS6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GAFA1Q96PS6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.23■□□□□ 0.35
GAFA1Q96PS6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.23■□□□□ 0.35
GAFA1Q96PS6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GAFA1Q96PS6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.23■□□□□ 0.35
GAFA1Q96PS6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.23■□□□□ 0.35
GAFA1Q96PS6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
GAFA1Q96PS6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
GAFA1Q96PS6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
GAFA1Q96PS6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GAFA1Q96PS6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GAFA1Q96PS6 AC011484.1-201ENST00000377652 1995 ntBASIC17.22■□□□□ 0.35
GAFA1Q96PS6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
GAFA1Q96PS6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GAFA1Q96PS6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GAFA1Q96PS6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
GAFA1Q96PS6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GAFA1Q96PS6 AC007322.1-201ENST00000426983 750 ntBASIC17.22■□□□□ 0.35
GAFA1Q96PS6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.22■□□□□ 0.35
GAFA1Q96PS6 AL591742.1-201ENST00000604433 565 ntBASIC17.22■□□□□ 0.35
GAFA1Q96PS6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.22■□□□□ 0.35
GAFA1Q96PS6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GAFA1Q96PS6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
GAFA1Q96PS6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
GAFA1Q96PS6 PLK5-205ENST00000642079 1969 ntBASIC17.22■□□□□ 0.35
GAFA1Q96PS6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.22■□□□□ 0.35
GAFA1Q96PS6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GAFA1Q96PS6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.21■□□□□ 0.35
GAFA1Q96PS6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GAFA1Q96PS6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
GAFA1Q96PS6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.21■□□□□ 0.35
GAFA1Q96PS6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms