Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.38■□□□□ 0.53
APH1AQ96BI3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
APH1AQ96BI3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
APH1AQ96BI3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.38■□□□□ 0.53
APH1AQ96BI3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.38■□□□□ 0.53
APH1AQ96BI3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.38■□□□□ 0.53
APH1AQ96BI3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APH1AQ96BI3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
APH1AQ96BI3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
APH1AQ96BI3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APH1AQ96BI3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APH1AQ96BI3 CROCCP5-201ENST00000436658 830 ntBASIC18.37■□□□□ 0.53
APH1AQ96BI3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APH1AQ96BI3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
APH1AQ96BI3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.37■□□□□ 0.53
APH1AQ96BI3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APH1AQ96BI3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APH1AQ96BI3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APH1AQ96BI3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.37■□□□□ 0.53
APH1AQ96BI3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
APH1AQ96BI3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.37■□□□□ 0.53
APH1AQ96BI3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
APH1AQ96BI3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
APH1AQ96BI3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
APH1AQ96BI3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.37■□□□□ 0.53
APH1AQ96BI3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.36■□□□□ 0.53
APH1AQ96BI3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
APH1AQ96BI3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APH1AQ96BI3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
APH1AQ96BI3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
APH1AQ96BI3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
APH1AQ96BI3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
APH1AQ96BI3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APH1AQ96BI3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.36■□□□□ 0.53
APH1AQ96BI3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APH1AQ96BI3 AC091799.1-201ENST00000422823 811 ntBASIC18.36■□□□□ 0.53
APH1AQ96BI3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.36■□□□□ 0.53
APH1AQ96BI3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APH1AQ96BI3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.36■□□□□ 0.53
APH1AQ96BI3 CDV3P1-201ENST00000471403 739 ntBASIC18.36■□□□□ 0.53
APH1AQ96BI3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
APH1AQ96BI3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.36■□□□□ 0.53
APH1AQ96BI3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APH1AQ96BI3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.36■□□□□ 0.53
APH1AQ96BI3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.36■□□□□ 0.53
APH1AQ96BI3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
APH1AQ96BI3 AC068338.2-201ENST00000563278 1430 ntBASIC18.36■□□□□ 0.53
APH1AQ96BI3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.36■□□□□ 0.53
APH1AQ96BI3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.36■□□□□ 0.53
APH1AQ96BI3 AC008694.1-202ENST00000636953 945 ntBASIC18.36■□□□□ 0.53
APH1AQ96BI3 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
APH1AQ96BI3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
APH1AQ96BI3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
APH1AQ96BI3 CLDN5-201ENST00000403084 2357 ntBASIC18.35■□□□□ 0.53
APH1AQ96BI3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APH1AQ96BI3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APH1AQ96BI3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APH1AQ96BI3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.35■□□□□ 0.53
APH1AQ96BI3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
APH1AQ96BI3 CYP2T1P-201ENST00000432607 1285 ntBASIC18.35■□□□□ 0.53
APH1AQ96BI3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.35■□□□□ 0.53
APH1AQ96BI3 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.35■□□□□ 0.53
APH1AQ96BI3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.35■□□□□ 0.53
APH1AQ96BI3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APH1AQ96BI3 AL162412.1-201ENST00000567129 965 ntBASIC18.35■□□□□ 0.53
APH1AQ96BI3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APH1AQ96BI3 AC069236.1-201ENST00000604339 616 ntBASIC18.35■□□□□ 0.53
APH1AQ96BI3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
APH1AQ96BI3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
APH1AQ96BI3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
APH1AQ96BI3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
APH1AQ96BI3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APH1AQ96BI3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APH1AQ96BI3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.34■□□□□ 0.53
APH1AQ96BI3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APH1AQ96BI3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APH1AQ96BI3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
APH1AQ96BI3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APH1AQ96BI3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.34■□□□□ 0.53
APH1AQ96BI3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
APH1AQ96BI3 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.34■□□□□ 0.53
APH1AQ96BI3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APH1AQ96BI3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.34■□□□□ 0.53
APH1AQ96BI3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APH1AQ96BI3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APH1AQ96BI3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APH1AQ96BI3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
APH1AQ96BI3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
APH1AQ96BI3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
APH1AQ96BI3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
APH1AQ96BI3 AL024507.2-201ENST00000606070 2574 ntBASIC18.34■□□□□ 0.53
APH1AQ96BI3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.33■□□□□ 0.53
APH1AQ96BI3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.33■□□□□ 0.53
APH1AQ96BI3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
APH1AQ96BI3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.33■□□□□ 0.53
APH1AQ96BI3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
APH1AQ96BI3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.33■□□□□ 0.53
APH1AQ96BI3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
APH1AQ96BI3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.33■□□□□ 0.52
APH1AQ96BI3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms