Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 MIR572-201ENST00000384983 95 ntBASIC17.4■□□□□ 0.38
RTN4IP1Q8WWV3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.4■□□□□ 0.38
RTN4IP1Q8WWV3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.4■□□□□ 0.38
RTN4IP1Q8WWV3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.4■□□□□ 0.38
RTN4IP1Q8WWV3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
RTN4IP1Q8WWV3 AC105233.4-201ENST00000642045 216 ntBASIC17.4■□□□□ 0.38
RTN4IP1Q8WWV3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RTN4IP1Q8WWV3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.4■□□□□ 0.38
RTN4IP1Q8WWV3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4IP1Q8WWV3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4IP1Q8WWV3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
RTN4IP1Q8WWV3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4IP1Q8WWV3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4IP1Q8WWV3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTN4IP1Q8WWV3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.39■□□□□ 0.38
RTN4IP1Q8WWV3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
RTN4IP1Q8WWV3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RTN4IP1Q8WWV3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTN4IP1Q8WWV3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTN4IP1Q8WWV3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTN4IP1Q8WWV3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTN4IP1Q8WWV3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.39■□□□□ 0.37
RTN4IP1Q8WWV3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTN4IP1Q8WWV3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTN4IP1Q8WWV3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RTN4IP1Q8WWV3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
RTN4IP1Q8WWV3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
RTN4IP1Q8WWV3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTN4IP1Q8WWV3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RTN4IP1Q8WWV3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RTN4IP1Q8WWV3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4IP1Q8WWV3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.37■□□□□ 0.37
RTN4IP1Q8WWV3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4IP1Q8WWV3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4IP1Q8WWV3 PLK5-205ENST00000642079 1969 ntBASIC17.37■□□□□ 0.37
RTN4IP1Q8WWV3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4IP1Q8WWV3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4IP1Q8WWV3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4IP1Q8WWV3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
RTN4IP1Q8WWV3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.37■□□□□ 0.37
RTN4IP1Q8WWV3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4IP1Q8WWV3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.37■□□□□ 0.37
RTN4IP1Q8WWV3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4IP1Q8WWV3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4IP1Q8WWV3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RTN4IP1Q8WWV3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4IP1Q8WWV3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4IP1Q8WWV3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4IP1Q8WWV3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4IP1Q8WWV3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4IP1Q8WWV3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTN4IP1Q8WWV3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.37■□□□□ 0.37
RTN4IP1Q8WWV3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RTN4IP1Q8WWV3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 AC007952.6-201ENST00000573168 2673 ntBASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 AC003957.1-201ENST00000625108 2673 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms