Protein–RNA interactions for Protein: Q8NG27

PJA1, E3 ubiquitin-protein ligase Praja-1, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PJA1Q8NG27 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PJA1Q8NG27 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PJA1Q8NG27 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PJA1Q8NG27 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.32■■□□□ 1
PJA1Q8NG27 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.31■■□□□ 1
PJA1Q8NG27 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.31■■□□□ 1
PJA1Q8NG27 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.31■■□□□ 1
PJA1Q8NG27 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PJA1Q8NG27 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.31■■□□□ 1
PJA1Q8NG27 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.31■■□□□ 1
PJA1Q8NG27 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.31■■□□□ 1
PJA1Q8NG27 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.31■■□□□ 1
PJA1Q8NG27 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PJA1Q8NG27 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PJA1Q8NG27 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PJA1Q8NG27 AC092368.3-202ENST00000574180 1591 ntBASIC21.31■■□□□ 1
PJA1Q8NG27 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PJA1Q8NG27 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PJA1Q8NG27 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PJA1Q8NG27 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PJA1Q8NG27 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PJA1Q8NG27 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.3■■□□□ 1
PJA1Q8NG27 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.3■■□□□ 1
PJA1Q8NG27 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PJA1Q8NG27 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PJA1Q8NG27 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PJA1Q8NG27 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.3■■□□□ 1
PJA1Q8NG27 AL589743.5-201ENST00000616611 1050 ntBASIC21.3■■□□□ 1
PJA1Q8NG27 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
PJA1Q8NG27 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PJA1Q8NG27 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
PJA1Q8NG27 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.29■■□□□ 1
PJA1Q8NG27 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PJA1Q8NG27 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.29■■□□□ 1
PJA1Q8NG27 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.29■■□□□ 1
PJA1Q8NG27 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PJA1Q8NG27 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PJA1Q8NG27 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.29■■□□□ 1
PJA1Q8NG27 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.29■■□□□ 1
PJA1Q8NG27 AC233263.1-201ENST00000578059 224 ntBASIC21.29■■□□□ 1
PJA1Q8NG27 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.29■■□□□ 1
PJA1Q8NG27 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PJA1Q8NG27 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PJA1Q8NG27 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PJA1Q8NG27 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PJA1Q8NG27 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PJA1Q8NG27 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PJA1Q8NG27 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.28■■□□□ 1
PJA1Q8NG27 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.28■■□□□ 1
PJA1Q8NG27 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
PJA1Q8NG27 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.28■■□□□ 1
PJA1Q8NG27 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.28■■□□□ 1
PJA1Q8NG27 AC069544.1-201ENST00000609399 999 ntBASIC21.28■■□□□ 1
PJA1Q8NG27 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PJA1Q8NG27 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PJA1Q8NG27 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
PJA1Q8NG27 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.27■■□□□ 1
PJA1Q8NG27 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
PJA1Q8NG27 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PJA1Q8NG27 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.27■■□□□ 1
PJA1Q8NG27 AC091799.1-201ENST00000422823 811 ntBASIC21.27■■□□□ 1
PJA1Q8NG27 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.27■■□□□ 1
PJA1Q8NG27 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.27■■□□□ 1
PJA1Q8NG27 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.27■■□□□ 1
PJA1Q8NG27 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.27■■□□□ 1
PJA1Q8NG27 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.27■■□□□ 1
PJA1Q8NG27 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.27■■□□□ 1
PJA1Q8NG27 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
PJA1Q8NG27 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.27■■□□□ 1
PJA1Q8NG27 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.27■■□□□ 1
PJA1Q8NG27 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
PJA1Q8NG27 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
PJA1Q8NG27 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PJA1Q8NG27 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PJA1Q8NG27 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PJA1Q8NG27 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PJA1Q8NG27 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.27■□□□□ 0.99
PJA1Q8NG27 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PJA1Q8NG27 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
PJA1Q8NG27 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PJA1Q8NG27 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PJA1Q8NG27 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PJA1Q8NG27 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PJA1Q8NG27 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PJA1Q8NG27 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.26■□□□□ 0.99
PJA1Q8NG27 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PJA1Q8NG27 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.26■□□□□ 0.99
PJA1Q8NG27 CDV3P1-201ENST00000471403 739 ntBASIC21.26■□□□□ 0.99
PJA1Q8NG27 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PJA1Q8NG27 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
PJA1Q8NG27 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PJA1Q8NG27 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PJA1Q8NG27 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PJA1Q8NG27 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.26■□□□□ 0.99
PJA1Q8NG27 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PJA1Q8NG27 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PJA1Q8NG27 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PJA1Q8NG27 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PJA1Q8NG27 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
PJA1Q8NG27 MCRIP2P1-201ENST00000394346 511 ntBASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms