Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SLX4Q8IY92 AC010542.4-201ENST00000563151 1910 ntBASIC25.56■■□□□ 1.68
SLX4Q8IY92 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC25.56■■□□□ 1.68
SLX4Q8IY92 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
SLX4Q8IY92 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SLX4Q8IY92 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SLX4Q8IY92 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SLX4Q8IY92 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC25.55■■□□□ 1.68
SLX4Q8IY92 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SLX4Q8IY92 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SLX4Q8IY92 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC25.55■■□□□ 1.68
SLX4Q8IY92 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SLX4Q8IY92 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SLX4Q8IY92 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC25.55■■□□□ 1.68
SLX4Q8IY92 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC25.55■■□□□ 1.68
SLX4Q8IY92 SNX21-213ENST00000614929 587 ntTSL 5 BASIC25.55■■□□□ 1.68
SLX4Q8IY92 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SLX4Q8IY92 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SLX4Q8IY92 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
SLX4Q8IY92 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SLX4Q8IY92 NXN-202ENST00000537628 1340 ntTSL 3 BASIC25.55■■□□□ 1.68
SLX4Q8IY92 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC25.54■■□□□ 1.68
SLX4Q8IY92 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SLX4Q8IY92 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
SLX4Q8IY92 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC25.54■■□□□ 1.68
SLX4Q8IY92 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC25.54■■□□□ 1.68
SLX4Q8IY92 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC25.54■■□□□ 1.68
SLX4Q8IY92 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
SLX4Q8IY92 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
SLX4Q8IY92 AC133561.5-201ENST00000635547 218 ntBASIC25.54■■□□□ 1.68
SLX4Q8IY92 AL023875.1-201ENST00000640777 796 ntBASIC25.54■■□□□ 1.68
SLX4Q8IY92 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SLX4Q8IY92 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SLX4Q8IY92 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC25.54■■□□□ 1.68
SLX4Q8IY92 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
SLX4Q8IY92 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SLX4Q8IY92 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SLX4Q8IY92 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
SLX4Q8IY92 AC239809.2-201ENST00000415381 517 ntBASIC25.53■■□□□ 1.68
SLX4Q8IY92 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC25.53■■□□□ 1.68
SLX4Q8IY92 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC25.53■■□□□ 1.68
SLX4Q8IY92 AC087633.2-202ENST00000565166 1439 ntBASIC25.53■■□□□ 1.68
SLX4Q8IY92 AC113410.3-201ENST00000623366 203 ntBASIC25.53■■□□□ 1.68
SLX4Q8IY92 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.53■■□□□ 1.68
SLX4Q8IY92 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SLX4Q8IY92 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SLX4Q8IY92 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC25.53■■□□□ 1.68
SLX4Q8IY92 NARF-205ENST00000412079 1760 ntTSL 5 BASIC25.53■■□□□ 1.68
SLX4Q8IY92 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SLX4Q8IY92 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SLX4Q8IY92 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
SLX4Q8IY92 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC25.53■■□□□ 1.68
SLX4Q8IY92 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC25.53■■□□□ 1.68
SLX4Q8IY92 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SLX4Q8IY92 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SLX4Q8IY92 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SLX4Q8IY92 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC25.52■■□□□ 1.68
SLX4Q8IY92 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC25.52■■□□□ 1.68
SLX4Q8IY92 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SLX4Q8IY92 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SLX4Q8IY92 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC25.52■■□□□ 1.68
SLX4Q8IY92 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC25.52■■□□□ 1.68
SLX4Q8IY92 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SLX4Q8IY92 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SLX4Q8IY92 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SLX4Q8IY92 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC25.51■■□□□ 1.68
SLX4Q8IY92 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLX4Q8IY92 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC25.51■■□□□ 1.67
SLX4Q8IY92 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC25.51■■□□□ 1.67
SLX4Q8IY92 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLX4Q8IY92 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.51■■□□□ 1.67
SLX4Q8IY92 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.51■■□□□ 1.67
SLX4Q8IY92 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLX4Q8IY92 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SLX4Q8IY92 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
SLX4Q8IY92 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC25.51■■□□□ 1.67
SLX4Q8IY92 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLX4Q8IY92 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC25.51■■□□□ 1.67
SLX4Q8IY92 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLX4Q8IY92 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
SLX4Q8IY92 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SLX4Q8IY92 KRT17P2-201ENST00000300992 1314 ntBASIC25.51■■□□□ 1.67
SLX4Q8IY92 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLX4Q8IY92 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SLX4Q8IY92 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SLX4Q8IY92 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC25.5■■□□□ 1.67
SLX4Q8IY92 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SLX4Q8IY92 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC25.5■■□□□ 1.67
SLX4Q8IY92 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC25.5■■□□□ 1.67
SLX4Q8IY92 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
SLX4Q8IY92 AC092053.2-201ENST00000640557 1818 ntBASIC25.5■■□□□ 1.67
SLX4Q8IY92 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC25.5■■□□□ 1.67
SLX4Q8IY92 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
SLX4Q8IY92 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
SLX4Q8IY92 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
SLX4Q8IY92 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC25.5■■□□□ 1.67
SLX4Q8IY92 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC25.5■■□□□ 1.67
SLX4Q8IY92 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC25.5■■□□□ 1.67
SLX4Q8IY92 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC25.5■■□□□ 1.67
SLX4Q8IY92 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms