Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC26.4■■□□□ 1.82
RC3H1Q5TC82 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RC3H1Q5TC82 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC26.4■■□□□ 1.82
RC3H1Q5TC82 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
RC3H1Q5TC82 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
RC3H1Q5TC82 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
RC3H1Q5TC82 KRT17P2-201ENST00000300992 1314 ntBASIC26.39■■□□□ 1.82
RC3H1Q5TC82 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RC3H1Q5TC82 AC010542.4-201ENST00000563151 1910 ntBASIC26.39■■□□□ 1.82
RC3H1Q5TC82 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RC3H1Q5TC82 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC26.39■■□□□ 1.82
RC3H1Q5TC82 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RC3H1Q5TC82 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC26.39■■□□□ 1.82
RC3H1Q5TC82 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
RC3H1Q5TC82 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC26.39■■□□□ 1.82
RC3H1Q5TC82 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RC3H1Q5TC82 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
RC3H1Q5TC82 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC26.39■■□□□ 1.82
RC3H1Q5TC82 AC124016.1-201ENST00000609552 612 ntBASIC26.39■■□□□ 1.82
RC3H1Q5TC82 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
RC3H1Q5TC82 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
RC3H1Q5TC82 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RC3H1Q5TC82 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
RC3H1Q5TC82 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RC3H1Q5TC82 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
RC3H1Q5TC82 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC26.38■■□□□ 1.81
RC3H1Q5TC82 LY6E-205ENST00000519611 635 ntTSL 3 BASIC26.38■■□□□ 1.81
RC3H1Q5TC82 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC26.38■■□□□ 1.81
RC3H1Q5TC82 REXO2-216ENST00000544196 452 ntTSL 3 BASIC26.38■■□□□ 1.81
RC3H1Q5TC82 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RC3H1Q5TC82 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
RC3H1Q5TC82 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
RC3H1Q5TC82 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RC3H1Q5TC82 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RC3H1Q5TC82 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
RC3H1Q5TC82 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC26.38■■□□□ 1.81
RC3H1Q5TC82 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC26.38■■□□□ 1.81
RC3H1Q5TC82 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
RC3H1Q5TC82 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
RC3H1Q5TC82 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RC3H1Q5TC82 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RC3H1Q5TC82 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC26.37■■□□□ 1.81
RC3H1Q5TC82 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC26.37■■□□□ 1.81
RC3H1Q5TC82 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
RC3H1Q5TC82 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RC3H1Q5TC82 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC26.37■■□□□ 1.81
RC3H1Q5TC82 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC26.37■■□□□ 1.81
RC3H1Q5TC82 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RC3H1Q5TC82 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
RC3H1Q5TC82 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
RC3H1Q5TC82 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC26.36■■□□□ 1.81
RC3H1Q5TC82 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC26.36■■□□□ 1.81
RC3H1Q5TC82 AC010331.1-201ENST00000611423 582 ntBASIC26.36■■□□□ 1.81
RC3H1Q5TC82 AC120498.8-201ENST00000614275 531 ntBASIC26.36■■□□□ 1.81
RC3H1Q5TC82 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RC3H1Q5TC82 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RC3H1Q5TC82 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
RC3H1Q5TC82 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RC3H1Q5TC82 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RC3H1Q5TC82 AC116050.2-201ENST00000612102 1779 ntBASIC26.35■■□□□ 1.81
RC3H1Q5TC82 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RC3H1Q5TC82 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
RC3H1Q5TC82 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RC3H1Q5TC82 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RC3H1Q5TC82 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RC3H1Q5TC82 TSPY7P-201ENST00000431358 1114 ntBASIC26.35■■□□□ 1.81
RC3H1Q5TC82 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC26.35■■□□□ 1.81
RC3H1Q5TC82 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
RC3H1Q5TC82 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RC3H1Q5TC82 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC26.35■■□□□ 1.81
RC3H1Q5TC82 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC26.35■■□□□ 1.81
RC3H1Q5TC82 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RC3H1Q5TC82 AL049637.2-201ENST00000641778 930 ntBASIC26.35■■□□□ 1.81
RC3H1Q5TC82 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RC3H1Q5TC82 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RC3H1Q5TC82 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RC3H1Q5TC82 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC26.35■■□□□ 1.81
RC3H1Q5TC82 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.34■■□□□ 1.81
RC3H1Q5TC82 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RC3H1Q5TC82 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RC3H1Q5TC82 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RC3H1Q5TC82 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
RC3H1Q5TC82 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RC3H1Q5TC82 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RC3H1Q5TC82 ABHD17AP6-201ENST00000458502 1044 ntBASIC26.34■■□□□ 1.81
RC3H1Q5TC82 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC26.34■■□□□ 1.81
RC3H1Q5TC82 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC26.34■■□□□ 1.81
RC3H1Q5TC82 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RC3H1Q5TC82 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RC3H1Q5TC82 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RC3H1Q5TC82 GGT1-206ENST00000404223 952 ntTSL 2 BASIC26.33■■□□□ 1.81
RC3H1Q5TC82 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
RC3H1Q5TC82 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
RC3H1Q5TC82 THEM4-205ENST00000489410 643 ntTSL 2 BASIC26.33■■□□□ 1.81
RC3H1Q5TC82 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC26.33■■□□□ 1.81
RC3H1Q5TC82 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RC3H1Q5TC82 TK2-204ENST00000525974 1178 ntTSL 2 BASIC26.33■■□□□ 1.81
RC3H1Q5TC82 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
RC3H1Q5TC82 AP001412.1-201ENST00000608405 714 ntBASIC26.33■■□□□ 1.81
RC3H1Q5TC82 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms