Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC58Q4VC31 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC58Q4VC31 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC58Q4VC31 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC58Q4VC31 AC073314.1-201ENST00000568729 2216 ntBASIC18.47■□□□□ 0.55
CCDC58Q4VC31 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC58Q4VC31 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC58Q4VC31 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC58Q4VC31 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC58Q4VC31 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC58Q4VC31 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CCDC58Q4VC31 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC58Q4VC31 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CCDC58Q4VC31 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC58Q4VC31 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC58Q4VC31 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC58Q4VC31 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC58Q4VC31 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC58Q4VC31 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC58Q4VC31 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC58Q4VC31 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CCDC58Q4VC31 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC58Q4VC31 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC58Q4VC31 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC58Q4VC31 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC58Q4VC31 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC58Q4VC31 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CCDC58Q4VC31 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC58Q4VC31 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC58Q4VC31 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC58Q4VC31 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC58Q4VC31 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCDC58Q4VC31 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC58Q4VC31 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCDC58Q4VC31 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC58Q4VC31 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC58Q4VC31 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC58Q4VC31 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC58Q4VC31 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC58Q4VC31 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CCDC58Q4VC31 DUX4L19-201ENST00000557448 1267 ntBASIC18.45■□□□□ 0.54
CCDC58Q4VC31 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.45■□□□□ 0.54
CCDC58Q4VC31 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC58Q4VC31 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC58Q4VC31 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC58Q4VC31 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC58Q4VC31 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC58Q4VC31 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC58Q4VC31 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC58Q4VC31 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCDC58Q4VC31 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC58Q4VC31 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CCDC58Q4VC31 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CCDC58Q4VC31 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CCDC58Q4VC31 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC58Q4VC31 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC58Q4VC31 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.44■□□□□ 0.54
CCDC58Q4VC31 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC58Q4VC31 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CCDC58Q4VC31 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC58Q4VC31 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.44■□□□□ 0.54
CCDC58Q4VC31 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC58Q4VC31 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC58Q4VC31 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC58Q4VC31 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
CCDC58Q4VC31 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC58Q4VC31 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC58Q4VC31 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC58Q4VC31 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC58Q4VC31 AC121338.2-201ENST00000622535 1744 ntBASIC18.43■□□□□ 0.54
CCDC58Q4VC31 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC58Q4VC31 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC58Q4VC31 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC58Q4VC31 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CCDC58Q4VC31 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.43■□□□□ 0.54
CCDC58Q4VC31 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC58Q4VC31 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.43■□□□□ 0.54
CCDC58Q4VC31 AC136469.2-201ENST00000623944 1028 ntBASIC18.43■□□□□ 0.54
CCDC58Q4VC31 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC58Q4VC31 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CCDC58Q4VC31 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.43■□□□□ 0.54
CCDC58Q4VC31 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC58Q4VC31 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC58Q4VC31 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC58Q4VC31 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC58Q4VC31 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CCDC58Q4VC31 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CCDC58Q4VC31 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC58Q4VC31 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC58Q4VC31 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC58Q4VC31 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC58Q4VC31 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC58Q4VC31 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC58Q4VC31 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC58Q4VC31 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC58Q4VC31 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC58Q4VC31 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC58Q4VC31 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC58Q4VC31 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC58Q4VC31 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms