Protein–RNA interactions for Protein: Q07953

SDO1, Ribosome maturation protein SDO1, yeastyeast

Known RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDO1Q07953 HAA1YPR008W 2085 nt2.14□□□□□ -2.07
SDO1Q07953 UTP6YDR449C 1323 nt2.14□□□□□ -2.07
SDO1Q07953 NUP100YKL068W 2880 nt2.13□□□□□ -2.07
SDO1Q07953 SNU114YKL173W 3027 nt2.13□□□□□ -2.07
SDO1Q07953 PHO91YNR013C 2685 nt2.13□□□□□ -2.07
SDO1Q07953 YER046W-AYER046W-A 330 nt2.13□□□□□ -2.07
SDO1Q07953 YGL117WYGL117W 798 nt2.13□□□□□ -2.07
SDO1Q07953 PEX4YGR133W 552 nt2.13□□□□□ -2.07
SDO1Q07953 RPL19BYBL027W 570 nt2.13□□□□□ -2.07
SDO1Q07953 RIM9YMR063W 720 nt2.13□□□□□ -2.07
SDO1Q07953 YBR090CYBR090C 369 nt2.13□□□□□ -2.07
SDO1Q07953 KAR4YCL055W 1008 nt2.13□□□□□ -2.07
SDO1Q07953 PEX34YCL056C 435 nt2.13□□□□□ -2.07
SDO1Q07953 AYT1YLL063C 1425 nt2.13□□□□□ -2.07
SDO1Q07953 BAS1YKR099W 2436 nt2.12□□□□□ -2.07
SDO1Q07953 BFR1YOR198C 1413 nt2.12□□□□□ -2.07
SDO1Q07953 PAU8YAL068C 363 nt2.12□□□□□ -2.07
SDO1Q07953 YLR257WYLR257W 966 nt2.12□□□□□ -2.07
SDO1Q07953 RRT16YNL105W 429 nt2.12□□□□□ -2.07
SDO1Q07953 YNR034W-AYNR034W-A 297 nt2.12□□□□□ -2.07
SDO1Q07953 CSI2YOL007C 1026 nt2.12□□□□□ -2.07
SDO1Q07953 PAU20YOL161C 363 nt2.12□□□□□ -2.07
SDO1Q07953 HAT1YPL001W 1125 nt2.12□□□□□ -2.07
SDO1Q07953 GPI17YDR434W 1605 nt2.12□□□□□ -2.07
SDO1Q07953 ESA1YOR244W 1338 nt2.12□□□□□ -2.07
SDO1Q07953 DSF2YBR007C 2211 nt2.11□□□□□ -2.07
SDO1Q07953 ADK1YDR226W 669 nt2.11□□□□□ -2.07
SDO1Q07953 tF(GAA)DtF(GAA)D 73 nt2.11□□□□□ -2.07
SDO1Q07953 tF(GAA)NtF(GAA)N 73 nt2.11□□□□□ -2.07
SDO1Q07953 GPI19YDR437W 423 nt2.11□□□□□ -2.07
SDO1Q07953 GUK1YDR454C 564 nt2.11□□□□□ -2.07
SDO1Q07953 SLD5YDR489W 885 nt2.11□□□□□ -2.07
SDO1Q07953 MTM1YGR257C 1101 nt2.11□□□□□ -2.07
SDO1Q07953 CKA1YIL035C 1119 nt2.11□□□□□ -2.07
SDO1Q07953 YML094C-AYML094C-A 402 nt2.11□□□□□ -2.07
SDO1Q07953 YDR179W-AYDR179W-A 1392 nt2.1□□□□□ -2.07
SDO1Q07953 ELG1YOR144C 2376 nt2.1□□□□□ -2.07
SDO1Q07953 YDR381C-AYDR381C-A 345 nt2.1□□□□□ -2.07
SDO1Q07953 YGR270C-AYGR270C-A 219 nt2.1□□□□□ -2.07
SDO1Q07953 IKI1YHR187W 930 nt2.1□□□□□ -2.07
SDO1Q07953 SGT1YOR057W 1188 nt2.1□□□□□ -2.07
SDO1Q07953 RAV1YJR033C 4074 nt2.1□□□□□ -2.07
SDO1Q07953 NPR1YNL183C 2373 nt2.09□□□□□ -2.07
SDO1Q07953 IRC8YJL051W 2469 nt2.09□□□□□ -2.07
SDO1Q07953 RGA2YDR379W 3030 nt2.09□□□□□ -2.07
SDO1Q07953 ARP5YNL059C 2268 nt2.09□□□□□ -2.07
SDO1Q07953 UBP16YPL072W 1500 nt2.09□□□□□ -2.07
SDO1Q07953 YEA4YEL004W 1029 nt2.09□□□□□ -2.07
SDO1Q07953 ACB1YGR037C 264 nt2.09□□□□□ -2.07
SDO1Q07953 ALB1YJL122W 528 nt2.09□□□□□ -2.07
SDO1Q07953 AIM32YML050W 936 nt2.09□□□□□ -2.07
SDO1Q07953 ARF3YOR094W 552 nt2.09□□□□□ -2.07
SDO1Q07953 YOR097CYOR097C 528 nt2.09□□□□□ -2.07
SDO1Q07953 ALG14YBR070C 714 nt2.09□□□□□ -2.07
SDO1Q07953 VMA9YCL005W-A 222 nt2.09□□□□□ -2.07
SDO1Q07953 ORC1YML065W 2745 nt2.09□□□□□ -2.08
SDO1Q07953 INP53YOR109W 3324 nt2.08□□□□□ -2.08
SDO1Q07953 TAE2YPL009C 3117 nt2.08□□□□□ -2.08
SDO1Q07953 GLC7YER133W 939 nt2.08□□□□□ -2.08
SDO1Q07953 YKL066WYKL066W 444 nt2.08□□□□□ -2.08
SDO1Q07953 YKL115CYKL115C 393 nt2.08□□□□□ -2.08
SDO1Q07953 ATX1YNL259C 222 nt2.08□□□□□ -2.08
SDO1Q07953 TYE7YOR344C 876 nt2.08□□□□□ -2.08
SDO1Q07953 TFB6YOR352W 1032 nt2.08□□□□□ -2.08
SDO1Q07953 YOR366WYOR366W 354 nt2.08□□□□□ -2.08
SDO1Q07953 CUP9YPL177C 921 nt2.08□□□□□ -2.08
SDO1Q07953 YHR078WYHR078W 1659 nt2.08□□□□□ -2.08
SDO1Q07953 SLK19YOR195W 2466 nt2.08□□□□□ -2.08
SDO1Q07953 SRP1YNL189W 1629 nt2.07□□□□□ -2.08
SDO1Q07953 YEL043WYEL043W 2871 nt2.07□□□□□ -2.08
SDO1Q07953 DBP10YDL031W 2988 nt2.07□□□□□ -2.08
SDO1Q07953 UBC13YDR092W 462 nt2.07□□□□□ -2.08
SDO1Q07953 YDR203WYDR203W 318 nt2.07□□□□□ -2.08
SDO1Q07953 SDC1YDR469W 528 nt2.07□□□□□ -2.08
SDO1Q07953 RPL27BYDR471W 411 nt2.07□□□□□ -2.08
SDO1Q07953 VAB2YEL005C 849 nt2.07□□□□□ -2.08
SDO1Q07953 ERG25YGR060W 930 nt2.07□□□□□ -2.08
SDO1Q07953 RPS17AYML024W 411 nt2.07□□□□□ -2.08
SDO1Q07953 YML090WYML090W 387 nt2.07□□□□□ -2.08
SDO1Q07953 YMR158C-AYMR158C-A 138 nt2.07□□□□□ -2.08
SDO1Q07953 YPR145C-AYPR145C-A 237 nt2.07□□□□□ -2.08
SDO1Q07953 RGA1YOR127W 3024 nt2.07□□□□□ -2.08
SDO1Q07953 SGS1YMR190C 4344 nt2.07□□□□□ -2.08
SDO1Q07953 YDR338CYDR338C 2088 nt2.06□□□□□ -2.08
SDO1Q07953 YIL166CYIL166C 1629 nt2.06□□□□□ -2.08
SDO1Q07953 STE11YLR362W 2154 nt2.06□□□□□ -2.08
SDO1Q07953 CBF2YGR140W 2871 nt2.06□□□□□ -2.08
SDO1Q07953 SSP1YHR184W 1716 nt2.06□□□□□ -2.08
SDO1Q07953 SEC16YPL085W 6588 nt2.06□□□□□ -2.08
SDO1Q07953 VPS64YDR200C 1815 nt2.06□□□□□ -2.08
SDO1Q07953 SNA4YDL123W 423 nt2.06□□□□□ -2.08
SDO1Q07953 CBS2YDR197W 1170 nt2.06□□□□□ -2.08
SDO1Q07953 YJR020WYJR020W 333 nt2.06□□□□□ -2.08
SDO1Q07953 YLR154W-AYLR154W-A 186 nt2.06□□□□□ -2.08
SDO1Q07953 ECI1YLR284C 843 nt2.06□□□□□ -2.08
SDO1Q07953 YMR316C-AYMR316C-A 312 nt2.06□□□□□ -2.08
SDO1Q07953 DIA1YMR316W 1011 nt2.06□□□□□ -2.08
SDO1Q07953 RPB8YOR224C 441 nt2.06□□□□□ -2.08
SDO1Q07953 RSA1YPL193W 1146 nt2.06□□□□□ -2.08
SDO1Q07953 GIS1YDR096W 2685 nt2.06□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms