Protein–RNA interactions for Protein: P46963

CTK3, CTD kinase subunit gamma, yeastyeast

Predicted RBP Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTK3P46963 snR24snR24 89 nt2.58□□□□□ -2
CTK3P46963 AIM4YBR194W 372 nt2.58□□□□□ -2
CTK3P46963 SHG1YBR258C 429 nt2.58□□□□□ -2
CTK3P46963 RAD18YCR066W 1464 nt2.58□□□□□ -2
CTK3P46963 ANR2YKL047W 1551 nt2.57□□□□□ -2
CTK3P46963 YGL039WYGL039W 1047 nt2.57□□□□□ -2
CTK3P46963 YGL109WYGL109W 324 nt2.57□□□□□ -2
CTK3P46963 TAD1YGL243W 1203 nt2.57□□□□□ -2
CTK3P46963 VEL1YGL258W 621 nt2.57□□□□□ -2
CTK3P46963 THG1YGR024C 714 nt2.57□□□□□ -2
CTK3P46963 PEX4YGR133W 552 nt2.57□□□□□ -2
CTK3P46963 MVB12YGR206W 306 nt2.57□□□□□ -2
CTK3P46963 LIN1YHR156C 1023 nt2.57□□□□□ -2
CTK3P46963 RNR2YJL026W 1200 nt2.57□□□□□ -2
CTK3P46963 YAL059C-AYAL059C-A 423 nt2.57□□□□□ -2
CTK3P46963 RPL16BYNL069C 597 nt2.57□□□□□ -2
CTK3P46963 MPP6YNR024W 561 nt2.57□□□□□ -2
CTK3P46963 RRG7YOR305W 729 nt2.57□□□□□ -2
CTK3P46963 YPL142CYPL142C 318 nt2.57□□□□□ -2
CTK3P46963 snR43snR43 209 nt2.57□□□□□ -2
CTK3P46963 GCD10YNL062C 1437 nt2.57□□□□□ -2
CTK3P46963 YCK2YNL154C 1641 nt2.57□□□□□ -2
CTK3P46963 NUM1YDR150W 8247 nt2.56□□□□□ -2
CTK3P46963 SLK19YOR195W 2466 nt2.56□□□□□ -2
CTK3P46963 SRD1YCR018C 666 nt2.56□□□□□ -2
CTK3P46963 RSM24YDR175C 960 nt2.56□□□□□ -2
CTK3P46963 HLR1YDR528W 1272 nt2.56□□□□□ -2
CTK3P46963 LOC1YFR001W 615 nt2.56□□□□□ -2
CTK3P46963 YFR054CYFR054C 579 nt2.56□□□□□ -2
CTK3P46963 YGL159WYGL159W 1113 nt2.56□□□□□ -2
CTK3P46963 YIL156W-BYIL156W-B 222 nt2.56□□□□□ -2
CTK3P46963 TMA10YLR327C 261 nt2.56□□□□□ -2
CTK3P46963 REC102YLR329W 795 nt2.56□□□□□ -2
CTK3P46963 YNL203CYNL203C 612 nt2.56□□□□□ -2
CTK3P46963 ATP11YNL315C 957 nt2.56□□□□□ -2
CTK3P46963 YBL108WYBL108W 306 nt2.56□□□□□ -2
CTK3P46963 ATP20YPR020W 348 nt2.56□□□□□ -2
CTK3P46963 POP7YBR167C 423 nt2.56□□□□□ -2
CTK3P46963 IRC8YJL051W 2469 nt2.56□□□□□ -2
CTK3P46963 NEW1YPL226W 3591 nt2.55□□□□□ -2
CTK3P46963 FKS3YMR306W 5358 nt2.55□□□□□ -2
CTK3P46963 YCR099CYCR099C 468 nt2.55□□□□□ -2
CTK3P46963 NSE4YDL105W 1209 nt2.55□□□□□ -2
CTK3P46963 STN1YDR082W 1485 nt2.55□□□□□ -2
CTK3P46963 YDR186CYDR186C 2634 nt2.55□□□□□ -2
CTK3P46963 YHR032W-AYHR032W-A 180 nt2.55□□□□□ -2
CTK3P46963 YIL046W-AYIL046W-A 165 nt2.55□□□□□ -2
CTK3P46963 JJJ2YJL162C 1752 nt2.55□□□□□ -2
CTK3P46963 YKL100CYKL100C 1764 nt2.55□□□□□ -2
CTK3P46963 SRL3YKR091W 741 nt2.55□□□□□ -2
CTK3P46963 ADI1YMR009W 540 nt2.55□□□□□ -2
CTK3P46963 PAI3YMR174C 207 nt2.55□□□□□ -2
CTK3P46963 SGS1YMR190C 4344 nt2.55□□□□□ -2
CTK3P46963 SRB4YER022W 2064 nt2.54□□□□□ -2
CTK3P46963 YPK1YKL126W 2043 nt2.54□□□□□ -2
CTK3P46963 YDL158CYDL158C 309 nt2.54□□□□□ -2
CTK3P46963 UBC13YDR092W 462 nt2.54□□□□□ -2
CTK3P46963 YEL050W-AYEL050W-A 192 nt2.54□□□□□ -2
CTK3P46963 YEL057CYEL057C 702 nt2.54□□□□□ -2
CTK3P46963 YER158W-AYER158W-A 216 nt2.54□□□□□ -2
CTK3P46963 YFL012WYFL012W 447 nt2.54□□□□□ -2
CTK3P46963 PGD1YGL025C 1194 nt2.54□□□□□ -2
CTK3P46963 YGR160WYGR160W 612 nt2.54□□□□□ -2
CTK3P46963 YGR293CYGR293C 462 nt2.54□□□□□ -2
CTK3P46963 PEX18YHR160C 852 nt2.54□□□□□ -2
CTK3P46963 MRPL38YKL170W 417 nt2.54□□□□□ -2
CTK3P46963 ARC18YLR370C 537 nt2.54□□□□□ -2
CTK3P46963 GRE2YOL151W 1029 nt2.54□□□□□ -2
CTK3P46963 ARF3YOR094W 552 nt2.54□□□□□ -2
CTK3P46963 ATP3YBR039W 936 nt2.54□□□□□ -2
CTK3P46963 MBA1YBR185C 837 nt2.54□□□□□ -2
CTK3P46963 YDR239CYDR239C 2364 nt2.54□□□□□ -2
CTK3P46963 PTP3YER075C 2787 nt2.54□□□□□ -2
CTK3P46963 DNA2YHR164C 4569 nt2.54□□□□□ -2
CTK3P46963 MET6YER091C 2304 nt2.53□□□□□ -2
CTK3P46963 BRE5YNR051C 1548 nt2.53□□□□□ -2
CTK3P46963 YDR248CYDR248C 582 nt2.53□□□□□ -2
CTK3P46963 YJL133C-AYJL133C-A 225 nt2.53□□□□□ -2
CTK3P46963 PAU23YLR037C 375 nt2.53□□□□□ -2
CTK3P46963 NBP1YLR457C 960 nt2.53□□□□□ -2
CTK3P46963 YPL119C-AYPL119C-A 264 nt2.53□□□□□ -2
CTK3P46963 ARK1YNL020C 1917 nt2.52□□□□□ -2.01
CTK3P46963 AGE1YDR524C 1449 nt2.52□□□□□ -2.01
CTK3P46963 NOP12YOL041C 1380 nt2.52□□□□□ -2.01
CTK3P46963 TPS2YDR074W 2691 nt2.52□□□□□ -2.01
CTK3P46963 PHO91YNR013C 2685 nt2.52□□□□□ -2.01
CTK3P46963 MED1YPR070W 1701 nt2.52□□□□□ -2.01
CTK3P46963 YCR013CYCR013C 648 nt2.52□□□□□ -2.01
CTK3P46963 YDR203WYDR203W 318 nt2.52□□□□□ -2.01
CTK3P46963 YER066C-AYER066C-A 501 nt2.52□□□□□ -2.01
CTK3P46963 YAP5YIR018W 738 nt2.52□□□□□ -2.01
CTK3P46963 VMA6YLR447C 1038 nt2.52□□□□□ -2.01
CTK3P46963 YOR277CYOR277C 309 nt2.52□□□□□ -2.01
CTK3P46963 OSW7YFR039C 1533 nt2.52□□□□□ -2.01
CTK3P46963 AVT2YEL064C 1443 nt2.51□□□□□ -2.01
CTK3P46963 ASI3YNL008C 2031 nt2.51□□□□□ -2.01
CTK3P46963 YNL193WYNL193W 1677 nt2.51□□□□□ -2.01
CTK3P46963 BIT61YJL058C 1632 nt2.51□□□□□ -2.01
CTK3P46963 KEI1YDR367W 666 nt2.51□□□□□ -2.01
CTK3P46963 YHL044WYHL044W 708 nt2.51□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 15.3 ms