Protein–RNA interactions for Protein: P40343

VPS27, Vacuolar protein sorting-associated protein 27, yeastyeast

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS27P40343 CTF13YMR094W 1437 nt3.48□□□□□ -1.85
VPS27P40343 DAD1YDR016C 285 nt3.48□□□□□ -1.85
VPS27P40343 MIC19YFR011C 513 nt3.48□□□□□ -1.85
VPS27P40343 STE18YJR086W 333 nt3.48□□□□□ -1.85
VPS27P40343 YKL023C-AYKL023C-A 228 nt3.48□□□□□ -1.85
VPS27P40343 SRL3YKR091W 741 nt3.48□□□□□ -1.85
VPS27P40343 YML037CYML037C 1023 nt3.48□□□□□ -1.85
VPS27P40343 RPL16BYNL069C 597 nt3.48□□□□□ -1.85
VPS27P40343 YOR283WYOR283W 693 nt3.48□□□□□ -1.85
VPS27P40343 MEI5YPL121C 669 nt3.48□□□□□ -1.85
VPS27P40343 SPO71YDR104C 3738 nt3.48□□□□□ -1.85
VPS27P40343 BPT1YLL015W 4680 nt3.48□□□□□ -1.85
VPS27P40343 STT4YLR305C 5703 nt3.47□□□□□ -1.85
VPS27P40343 NET1YJL076W 3570 nt3.47□□□□□ -1.85
VPS27P40343 YGR027W-BYGR027W-B 5268 nt3.47□□□□□ -1.85
VPS27P40343 YLR227W-BYLR227W-B 5268 nt3.47□□□□□ -1.85
VPS27P40343 YPR158C-DYPR158C-D 5268 nt3.47□□□□□ -1.85
VPS27P40343 ORC1YML065W 2745 nt3.47□□□□□ -1.85
VPS27P40343 snR5snR5 204 nt3.47□□□□□ -1.85
VPS27P40343 snR9snR9 187 nt3.47□□□□□ -1.85
VPS27P40343 YIL174WYIL174W 228 nt3.47□□□□□ -1.85
VPS27P40343 YJL119CYJL119C 324 nt3.47□□□□□ -1.85
VPS27P40343 YJL222W-AYJL222W-A 228 nt3.47□□□□□ -1.85
VPS27P40343 TDA8YAL064C-A 381 nt3.47□□□□□ -1.85
VPS27P40343 YMR254CYMR254C 309 nt3.47□□□□□ -1.85
VPS27P40343 MPP6YNR024W 561 nt3.47□□□□□ -1.85
VPS27P40343 SEC66YBR171W 621 nt3.47□□□□□ -1.85
VPS27P40343 AIM4YBR194W 372 nt3.47□□□□□ -1.85
VPS27P40343 SOK1YDR006C 2706 nt3.47□□□□□ -1.85
VPS27P40343 CDC20YGL116W 1833 nt3.47□□□□□ -1.85
VPS27P40343 AXL1YPR122W 3627 nt3.46□□□□□ -1.86
VPS27P40343 YDR029WYDR029W 315 nt3.46□□□□□ -1.86
VPS27P40343 tC(GCA)BtC(GCA)B 72 nt3.46□□□□□ -1.86
VPS27P40343 tC(GCA)GtC(GCA)G 72 nt3.46□□□□□ -1.86
VPS27P40343 tC(GCA)P1tC(GCA)P1 72 nt3.46□□□□□ -1.86
VPS27P40343 tC(GCA)P2tC(GCA)P2 72 nt3.46□□□□□ -1.86
VPS27P40343 PEA2YER149C 1263 nt3.46□□□□□ -1.86
VPS27P40343 RPL14BYHL001W 417 nt3.46□□□□□ -1.86
VPS27P40343 RLP24YLR009W 600 nt3.46□□□□□ -1.86
VPS27P40343 GMC2YLR445W 567 nt3.46□□□□□ -1.86
VPS27P40343 COX14YML129C 213 nt3.46□□□□□ -1.86
VPS27P40343 YMR187CYMR187C 1296 nt3.46□□□□□ -1.86
VPS27P40343 YPL068CYPL068C 882 nt3.46□□□□□ -1.86
VPS27P40343 YBR051WYBR051W 351 nt3.46□□□□□ -1.86
VPS27P40343 AFT2YPL202C 1251 nt3.46□□□□□ -1.86
VPS27P40343 RIM13YMR154C 2184 nt3.46□□□□□ -1.86
VPS27P40343 ESL1YIL151C 3357 nt3.46□□□□□ -1.86
VPS27P40343 PSY2YNL201C 2577 nt3.46□□□□□ -1.86
VPS27P40343 SHS1YDL225W 1656 nt3.46□□□□□ -1.86
VPS27P40343 RSE1YML049C 4086 nt3.45□□□□□ -1.86
VPS27P40343 RGR1YLR071C 3249 nt3.45□□□□□ -1.86
VPS27P40343 SNA4YDL123W 423 nt3.45□□□□□ -1.86
VPS27P40343 YLR202CYLR202C 327 nt3.45□□□□□ -1.86
VPS27P40343 YLR257WYLR257W 966 nt3.45□□□□□ -1.86
VPS27P40343 MSN1YOL116W 1149 nt3.45□□□□□ -1.86
VPS27P40343 BUD21YOR078W 645 nt3.45□□□□□ -1.86
VPS27P40343 ARF3YOR094W 552 nt3.45□□□□□ -1.86
VPS27P40343 NTC20YBR188C 423 nt3.45□□□□□ -1.86
VPS27P40343 ADY4YLR227C 1482 nt3.45□□□□□ -1.86
VPS27P40343 YJL132WYJL132W 2253 nt3.45□□□□□ -1.86
VPS27P40343 15S_rRNA15S_rRNA 1649 nt3.44□□□□□ -1.86
VPS27P40343 NEL1YHR035W 1893 nt3.44□□□□□ -1.86
VPS27P40343 YDR018CYDR018C 1191 nt3.44□□□□□ -1.86
VPS27P40343 PRS3YHL011C 963 nt3.44□□□□□ -1.86
VPS27P40343 YHR213WYHR213W 597 nt3.44□□□□□ -1.86
VPS27P40343 YHR214C-DYHR214C-D 294 nt3.44□□□□□ -1.86
VPS27P40343 YJR141WYJR141W 1044 nt3.44□□□□□ -1.86
VPS27P40343 YAR062WYAR062W 597 nt3.44□□□□□ -1.86
VPS27P40343 YAR069CYAR069C 294 nt3.44□□□□□ -1.86
VPS27P40343 UNG1YML021C 1080 nt3.44□□□□□ -1.86
VPS27P40343 RTT10YPL183C 3042 nt3.44□□□□□ -1.86
VPS27P40343 PFF1YBR074W 2931 nt3.44□□□□□ -1.86
VPS27P40343 DYN2YDR424C 279 nt3.43□□□□□ -1.86
VPS27P40343 PNC1YGL037C 651 nt3.43□□□□□ -1.86
VPS27P40343 TCD1YHR003C 1290 nt3.43□□□□□ -1.86
VPS27P40343 BAT1YHR208W 1182 nt3.43□□□□□ -1.86
VPS27P40343 YAP5YIR018W 738 nt3.43□□□□□ -1.86
VPS27P40343 MCR1YKL150W 909 nt3.43□□□□□ -1.86
VPS27P40343 CDC123YLR215C 1083 nt3.43□□□□□ -1.86
VPS27P40343 RCN2YOR220W 798 nt3.43□□□□□ -1.86
VPS27P40343 MRPL40YPL173W 894 nt3.43□□□□□ -1.86
VPS27P40343 IKI3YLR384C 4050 nt3.43□□□□□ -1.86
VPS27P40343 BCK1YJL095W 4437 nt3.43□□□□□ -1.86
VPS27P40343 YPL150WYPL150W 2706 nt3.42□□□□□ -1.86
VPS27P40343 HOP1YIL072W 1818 nt3.42□□□□□ -1.86
VPS27P40343 NCS2YNL119W 1482 nt3.42□□□□□ -1.86
VPS27P40343 YIR020C-BYIR020C-B 735 nt3.42□□□□□ -1.86
VPS27P40343 MBB1YJL199C 327 nt3.42□□□□□ -1.86
VPS27P40343 ACF4YJR083C 930 nt3.42□□□□□ -1.86
VPS27P40343 ATP18YML081C-A 180 nt3.42□□□□□ -1.86
VPS27P40343 YBR071WYBR071W 636 nt3.42□□□□□ -1.86
VPS27P40343 YNL193WYNL193W 1677 nt3.42□□□□□ -1.86
VPS27P40343 INP52YNL106C 3552 nt3.42□□□□□ -1.86
VPS27P40343 RAX2YLR084C 3663 nt3.41□□□□□ -1.86
VPS27P40343 RRM3YHR031C 2172 nt3.41□□□□□ -1.86
VPS27P40343 YDR115WYDR115W 318 nt3.41□□□□□ -1.86
VPS27P40343 TDA2YER071C 381 nt3.41□□□□□ -1.86
VPS27P40343 LRP1YHR081W 555 nt3.41□□□□□ -1.86
VPS27P40343 YJL086CYJL086C 369 nt3.41□□□□□ -1.86
VPS27P40343 RPL23AYBL087C 414 nt3.41□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 27 ms