Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCK1P35558 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCK1P35558 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCK1P35558 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.76■■□□□ 1.07
PCK1P35558 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCK1P35558 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCK1P35558 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCK1P35558 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PCK1P35558 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCK1P35558 KRT16P2-201ENST00000414673 1423 ntBASIC21.75■■□□□ 1.07
PCK1P35558 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PCK1P35558 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCK1P35558 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCK1P35558 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCK1P35558 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCK1P35558 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCK1P35558 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCK1P35558 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCK1P35558 DUX4L2-201ENST00000561772 1275 ntBASIC21.75■■□□□ 1.07
PCK1P35558 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.75■■□□□ 1.07
PCK1P35558 DUX4L6-201ENST00000626483 1275 ntBASIC21.75■■□□□ 1.07
PCK1P35558 DUX4L1-201ENST00000627662 1275 ntBASIC21.75■■□□□ 1.07
PCK1P35558 DUX4L8-201ENST00000629013 1275 ntBASIC21.75■■□□□ 1.07
PCK1P35558 DUX4L3-201ENST00000630187 1275 ntBASIC21.75■■□□□ 1.07
PCK1P35558 DUX4L7-201ENST00000630678 1275 ntBASIC21.75■■□□□ 1.07
PCK1P35558 DUX4L5-201ENST00000630834 1275 ntBASIC21.75■■□□□ 1.07
PCK1P35558 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PCK1P35558 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PCK1P35558 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
PCK1P35558 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCK1P35558 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.74■■□□□ 1.07
PCK1P35558 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCK1P35558 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCK1P35558 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.74■■□□□ 1.07
PCK1P35558 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCK1P35558 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.74■■□□□ 1.07
PCK1P35558 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCK1P35558 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.74■■□□□ 1.07
PCK1P35558 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCK1P35558 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCK1P35558 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCK1P35558 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCK1P35558 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCK1P35558 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCK1P35558 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCK1P35558 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCK1P35558 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCK1P35558 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.73■■□□□ 1.07
PCK1P35558 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.73■■□□□ 1.07
PCK1P35558 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.73■■□□□ 1.07
PCK1P35558 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCK1P35558 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCK1P35558 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.73■■□□□ 1.07
PCK1P35558 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.73■■□□□ 1.07
PCK1P35558 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCK1P35558 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.73■■□□□ 1.07
PCK1P35558 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCK1P35558 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCK1P35558 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCK1P35558 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCK1P35558 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PCK1P35558 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCK1P35558 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCK1P35558 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCK1P35558 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCK1P35558 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.72■■□□□ 1.07
PCK1P35558 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PCK1P35558 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
PCK1P35558 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCK1P35558 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCK1P35558 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCK1P35558 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.72■■□□□ 1.07
PCK1P35558 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.72■■□□□ 1.07
PCK1P35558 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCK1P35558 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.72■■□□□ 1.07
PCK1P35558 AP001160.3-201ENST00000601484 763 ntBASIC21.72■■□□□ 1.07
PCK1P35558 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.72■■□□□ 1.07
PCK1P35558 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCK1P35558 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.72■■□□□ 1.07
PCK1P35558 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PCK1P35558 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PCK1P35558 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCK1P35558 AC004854.2-201ENST00000608450 1441 ntBASIC21.72■■□□□ 1.07
PCK1P35558 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCK1P35558 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PCK1P35558 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCK1P35558 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCK1P35558 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.71■■□□□ 1.07
PCK1P35558 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.71■■□□□ 1.07
PCK1P35558 AC120498.10-201ENST00000621827 505 ntBASIC21.71■■□□□ 1.07
PCK1P35558 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.71■■□□□ 1.07
PCK1P35558 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.71■■□□□ 1.07
PCK1P35558 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCK1P35558 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCK1P35558 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCK1P35558 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCK1P35558 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCK1P35558 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCK1P35558 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.7■■□□□ 1.06
PCK1P35558 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms