Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC12P31275 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.36■□□□□ 0.53
HOXC12P31275 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.36■□□□□ 0.53
HOXC12P31275 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HOXC12P31275 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.36■□□□□ 0.53
HOXC12P31275 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
HOXC12P31275 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HOXC12P31275 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC12P31275 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC12P31275 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HOXC12P31275 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC12P31275 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.35■□□□□ 0.53
HOXC12P31275 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC12P31275 AC061975.6-201ENST00000579045 1553 ntBASIC18.35■□□□□ 0.53
HOXC12P31275 AC245052.3-201ENST00000450182 901 ntBASIC18.35■□□□□ 0.53
HOXC12P31275 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.35■□□□□ 0.53
HOXC12P31275 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.35■□□□□ 0.53
HOXC12P31275 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.35■□□□□ 0.53
HOXC12P31275 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.35■□□□□ 0.53
HOXC12P31275 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.35■□□□□ 0.53
HOXC12P31275 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.35■□□□□ 0.53
HOXC12P31275 AC008687.6-201ENST00000596318 630 ntBASIC18.35■□□□□ 0.53
HOXC12P31275 AC010536.3-201ENST00000620306 533 ntBASIC18.35■□□□□ 0.53
HOXC12P31275 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.35■□□□□ 0.53
HOXC12P31275 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC12P31275 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC12P31275 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.35■□□□□ 0.53
HOXC12P31275 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC12P31275 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC12P31275 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC12P31275 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HOXC12P31275 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
HOXC12P31275 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.35■□□□□ 0.53
HOXC12P31275 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.35■□□□□ 0.53
HOXC12P31275 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
HOXC12P31275 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC12P31275 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC12P31275 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.34■□□□□ 0.53
HOXC12P31275 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC12P31275 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC12P31275 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC12P31275 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC12P31275 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.34■□□□□ 0.53
HOXC12P31275 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC12P31275 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC12P31275 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.34■□□□□ 0.53
HOXC12P31275 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.34■□□□□ 0.53
HOXC12P31275 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC12P31275 AC013268.1-206ENST00000638368 961 ntBASIC18.34■□□□□ 0.53
HOXC12P31275 AC112229.1-201ENST00000639295 961 ntBASIC18.34■□□□□ 0.53
HOXC12P31275 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC12P31275 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
HOXC12P31275 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HOXC12P31275 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.34■□□□□ 0.53
HOXC12P31275 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.34■□□□□ 0.53
HOXC12P31275 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HOXC12P31275 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
HOXC12P31275 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
HOXC12P31275 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HOXC12P31275 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HOXC12P31275 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
HOXC12P31275 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.33■□□□□ 0.53
HOXC12P31275 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
HOXC12P31275 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HOXC12P31275 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.33■□□□□ 0.52
HOXC12P31275 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC12P31275 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC12P31275 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC12P31275 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HOXC12P31275 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.33■□□□□ 0.52
HOXC12P31275 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.33■□□□□ 0.52
HOXC12P31275 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC12P31275 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.33■□□□□ 0.52
HOXC12P31275 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HOXC12P31275 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC12P31275 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HOXC12P31275 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC12P31275 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC12P31275 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
HOXC12P31275 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC12P31275 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HOXC12P31275 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC12P31275 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC12P31275 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC12P31275 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC12P31275 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC12P31275 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC12P31275 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC12P31275 EP400NL-214ENST00000641289 2402 ntBASIC18.32■□□□□ 0.52
HOXC12P31275 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HOXC12P31275 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HOXC12P31275 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC12P31275 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC12P31275 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC12P31275 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXC12P31275 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HOXC12P31275 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC12P31275 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC12P31275 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXC12P31275 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms