Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.78■□□□□ 0.92
VCLP18206 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.78■□□□□ 0.92
VCLP18206 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
VCLP18206 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
VCLP18206 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.78■□□□□ 0.92
VCLP18206 KRT18P20-201ENST00000548986 1279 ntBASIC20.78■□□□□ 0.92
VCLP18206 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.78■□□□□ 0.92
VCLP18206 IKBKGP1-201ENST00000612193 1073 ntBASIC20.78■□□□□ 0.92
VCLP18206 AC120498.10-201ENST00000621827 505 ntBASIC20.78■□□□□ 0.92
VCLP18206 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VCLP18206 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.78■□□□□ 0.92
VCLP18206 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
VCLP18206 AL157384.1-201ENST00000445995 2473 ntBASIC20.78■□□□□ 0.92
VCLP18206 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.78■□□□□ 0.92
VCLP18206 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.77■□□□□ 0.92
VCLP18206 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCLP18206 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VCLP18206 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
VCLP18206 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCLP18206 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.77■□□□□ 0.92
VCLP18206 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.77■□□□□ 0.92
VCLP18206 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCLP18206 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.77■□□□□ 0.92
VCLP18206 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
VCLP18206 AC006015.1-201ENST00000429970 570 ntBASIC20.77■□□□□ 0.92
VCLP18206 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
VCLP18206 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.77■□□□□ 0.92
VCLP18206 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.77■□□□□ 0.92
VCLP18206 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.77■□□□□ 0.92
VCLP18206 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.77■□□□□ 0.92
VCLP18206 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VCLP18206 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.77■□□□□ 0.92
VCLP18206 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCLP18206 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
VCLP18206 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCLP18206 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCLP18206 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.77■□□□□ 0.92
VCLP18206 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
VCLP18206 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.91
VCLP18206 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
VCLP18206 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VCLP18206 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VCLP18206 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.76■□□□□ 0.91
VCLP18206 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
VCLP18206 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
VCLP18206 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
VCLP18206 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VCLP18206 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.76■□□□□ 0.91
VCLP18206 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
VCLP18206 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
VCLP18206 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.76■□□□□ 0.91
VCLP18206 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VCLP18206 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VCLP18206 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VCLP18206 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VCLP18206 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VCLP18206 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VCLP18206 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
VCLP18206 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VCLP18206 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VCLP18206 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.76■□□□□ 0.91
VCLP18206 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.76■□□□□ 0.91
VCLP18206 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
VCLP18206 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VCLP18206 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VCLP18206 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VCLP18206 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.75■□□□□ 0.91
VCLP18206 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VCLP18206 LINC01521-201ENST00000504184 1943 ntBASIC20.75■□□□□ 0.91
VCLP18206 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
VCLP18206 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VCLP18206 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.75■□□□□ 0.91
VCLP18206 POU5F1P4-201ENST00000413175 1085 ntBASIC20.75■□□□□ 0.91
VCLP18206 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VCLP18206 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.75■□□□□ 0.91
VCLP18206 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
VCLP18206 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VCLP18206 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.75■□□□□ 0.91
VCLP18206 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
VCLP18206 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
VCLP18206 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.75■□□□□ 0.91
VCLP18206 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
VCLP18206 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.75■□□□□ 0.91
VCLP18206 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VCLP18206 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.74■□□□□ 0.91
VCLP18206 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VCLP18206 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCLP18206 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCLP18206 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCLP18206 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.74■□□□□ 0.91
VCLP18206 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VCLP18206 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCLP18206 AC004911.1-201ENST00000416316 871 ntBASIC20.74■□□□□ 0.91
VCLP18206 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.74■□□□□ 0.91
VCLP18206 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCLP18206 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.74■□□□□ 0.91
VCLP18206 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.74■□□□□ 0.91
VCLP18206 BID-214ENST00000617586 542 ntTSL 5 BASIC20.74■□□□□ 0.91
VCLP18206 AC092437.1-201ENST00000624794 1048 ntBASIC20.74■□□□□ 0.91
VCLP18206 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms