Protein–RNA interactions for Protein: P16452

EPB42, Erythrocyte membrane protein band 4.2, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42P16452 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPB42P16452 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPB42P16452 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EPB42P16452 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
EPB42P16452 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EPB42P16452 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
EPB42P16452 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EPB42P16452 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
EPB42P16452 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
EPB42P16452 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EPB42P16452 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
EPB42P16452 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
EPB42P16452 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.15■□□□□ 0.82
EPB42P16452 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EPB42P16452 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
EPB42P16452 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.15■□□□□ 0.82
EPB42P16452 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.15■□□□□ 0.82
EPB42P16452 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EPB42P16452 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
EPB42P16452 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
EPB42P16452 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
EPB42P16452 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
EPB42P16452 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
EPB42P16452 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
EPB42P16452 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
EPB42P16452 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
EPB42P16452 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
EPB42P16452 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
EPB42P16452 AL157384.1-201ENST00000445995 2473 ntBASIC20.14■□□□□ 0.82
EPB42P16452 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
EPB42P16452 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
EPB42P16452 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
EPB42P16452 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EPB42P16452 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.14■□□□□ 0.81
EPB42P16452 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
EPB42P16452 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.14■□□□□ 0.81
EPB42P16452 AIRN-201ENST00000601203 4374 ntBASIC20.14■□□□□ 0.81
EPB42P16452 KRT16P2-201ENST00000414673 1423 ntBASIC20.14■□□□□ 0.81
EPB42P16452 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.14■□□□□ 0.81
EPB42P16452 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EPB42P16452 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EPB42P16452 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.14■□□□□ 0.81
EPB42P16452 ZNRF2P3-201ENST00000424200 374 ntBASIC20.14■□□□□ 0.81
EPB42P16452 AC010141.2-201ENST00000452426 721 ntBASIC20.14■□□□□ 0.81
EPB42P16452 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EPB42P16452 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.14■□□□□ 0.81
EPB42P16452 AC104187.1-201ENST00000607510 612 ntBASIC20.14■□□□□ 0.81
EPB42P16452 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.14■□□□□ 0.81
EPB42P16452 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
EPB42P16452 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.14■□□□□ 0.81
EPB42P16452 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
EPB42P16452 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
EPB42P16452 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.13■□□□□ 0.81
EPB42P16452 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.13■□□□□ 0.81
EPB42P16452 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EPB42P16452 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
EPB42P16452 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.13■□□□□ 0.81
EPB42P16452 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EPB42P16452 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
EPB42P16452 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.13■□□□□ 0.81
EPB42P16452 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EPB42P16452 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EPB42P16452 DUX4L2-201ENST00000561772 1275 ntBASIC20.13■□□□□ 0.81
EPB42P16452 CCDC92B-201ENST00000575506 885 ntBASIC20.13■□□□□ 0.81
EPB42P16452 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EPB42P16452 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.13■□□□□ 0.81
EPB42P16452 DUX4L6-201ENST00000626483 1275 ntBASIC20.13■□□□□ 0.81
EPB42P16452 DUX4L1-201ENST00000627662 1275 ntBASIC20.13■□□□□ 0.81
EPB42P16452 DUX4L8-201ENST00000629013 1275 ntBASIC20.13■□□□□ 0.81
EPB42P16452 DUX4L3-201ENST00000630187 1275 ntBASIC20.13■□□□□ 0.81
EPB42P16452 DUX4L7-201ENST00000630678 1275 ntBASIC20.13■□□□□ 0.81
EPB42P16452 DUX4L5-201ENST00000630834 1275 ntBASIC20.13■□□□□ 0.81
EPB42P16452 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.13■□□□□ 0.81
EPB42P16452 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.13■□□□□ 0.81
EPB42P16452 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EPB42P16452 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
EPB42P16452 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EPB42P16452 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
EPB42P16452 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
EPB42P16452 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
EPB42P16452 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EPB42P16452 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.12■□□□□ 0.81
EPB42P16452 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EPB42P16452 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.12■□□□□ 0.81
EPB42P16452 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPB42P16452 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPB42P16452 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EPB42P16452 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPB42P16452 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EPB42P16452 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.12■□□□□ 0.81
EPB42P16452 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.12■□□□□ 0.81
EPB42P16452 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.12■□□□□ 0.81
EPB42P16452 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.12■□□□□ 0.81
EPB42P16452 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.12■□□□□ 0.81
EPB42P16452 KRT18P14-201ENST00000534205 1250 ntBASIC20.12■□□□□ 0.81
EPB42P16452 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EPB42P16452 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EPB42P16452 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPB42P16452 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
EPB42P16452 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms