Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PF4V1P10720 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PF4V1P10720 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PF4V1P10720 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PF4V1P10720 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.4■□□□□ 0.22
PF4V1P10720 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PF4V1P10720 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PF4V1P10720 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PF4V1P10720 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PF4V1P10720 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PF4V1P10720 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.4■□□□□ 0.22
PF4V1P10720 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PF4V1P10720 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
PF4V1P10720 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PF4V1P10720 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
PF4V1P10720 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.39■□□□□ 0.21
PF4V1P10720 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.39■□□□□ 0.21
PF4V1P10720 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PF4V1P10720 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.39■□□□□ 0.21
PF4V1P10720 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PF4V1P10720 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PF4V1P10720 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.39■□□□□ 0.21
PF4V1P10720 TSPY6P-201ENST00000448518 926 ntBASIC16.39■□□□□ 0.21
PF4V1P10720 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.39■□□□□ 0.21
PF4V1P10720 AF201337.1-201ENST00000520239 748 ntBASIC16.39■□□□□ 0.21
PF4V1P10720 CD99P1-205ENST00000527459 561 ntBASIC16.39■□□□□ 0.21
PF4V1P10720 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.39■□□□□ 0.21
PF4V1P10720 AL050303.2-201ENST00000619798 666 ntBASIC16.39■□□□□ 0.21
PF4V1P10720 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.39■□□□□ 0.21
PF4V1P10720 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PF4V1P10720 AC013268.1-206ENST00000638368 961 ntBASIC16.39■□□□□ 0.21
PF4V1P10720 AC112229.1-201ENST00000639295 961 ntBASIC16.39■□□□□ 0.21
PF4V1P10720 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PF4V1P10720 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.39■□□□□ 0.21
PF4V1P10720 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.39■□□□□ 0.21
PF4V1P10720 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PF4V1P10720 AC244015.2-201ENST00000616358 1861 ntBASIC16.39■□□□□ 0.21
PF4V1P10720 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PF4V1P10720 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PF4V1P10720 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PF4V1P10720 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.39■□□□□ 0.21
PF4V1P10720 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PF4V1P10720 LINC00565-201ENST00000562710 2331 ntBASIC16.39■□□□□ 0.21
PF4V1P10720 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PF4V1P10720 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.38■□□□□ 0.21
PF4V1P10720 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PF4V1P10720 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PF4V1P10720 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PF4V1P10720 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PF4V1P10720 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.38■□□□□ 0.21
PF4V1P10720 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PF4V1P10720 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PF4V1P10720 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PF4V1P10720 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PF4V1P10720 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.38■□□□□ 0.21
PF4V1P10720 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
PF4V1P10720 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.38■□□□□ 0.21
PF4V1P10720 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PF4V1P10720 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PF4V1P10720 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PF4V1P10720 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PF4V1P10720 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PF4V1P10720 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PF4V1P10720 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PF4V1P10720 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PF4V1P10720 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PF4V1P10720 KRT16P2-201ENST00000414673 1423 ntBASIC16.37■□□□□ 0.21
PF4V1P10720 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PF4V1P10720 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PF4V1P10720 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PF4V1P10720 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PF4V1P10720 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PF4V1P10720 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PF4V1P10720 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC16.37■□□□□ 0.21
PF4V1P10720 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PF4V1P10720 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PF4V1P10720 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PF4V1P10720 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.37■□□□□ 0.21
PF4V1P10720 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.37■□□□□ 0.21
PF4V1P10720 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.37■□□□□ 0.21
PF4V1P10720 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
PF4V1P10720 AC105036.2-201ENST00000569468 176 ntBASIC16.37■□□□□ 0.21
PF4V1P10720 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.37■□□□□ 0.21
PF4V1P10720 AC008694.1-202ENST00000636953 945 ntBASIC16.37■□□□□ 0.21
PF4V1P10720 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PF4V1P10720 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PF4V1P10720 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PF4V1P10720 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PF4V1P10720 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PF4V1P10720 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PF4V1P10720 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PF4V1P10720 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PF4V1P10720 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.37■□□□□ 0.21
PF4V1P10720 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PF4V1P10720 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PF4V1P10720 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.36■□□□□ 0.21
PF4V1P10720 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PF4V1P10720 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PF4V1P10720 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.36■□□□□ 0.21
PF4V1P10720 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms