Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
HOXC6P09630 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.58■■□□□ 1.36
HOXC6P09630 AC026471.6-201ENST00000622954 1905 ntBASIC23.57■■□□□ 1.36
HOXC6P09630 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
HOXC6P09630 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
HOXC6P09630 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.57■■□□□ 1.36
HOXC6P09630 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
HOXC6P09630 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
HOXC6P09630 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC23.57■■□□□ 1.36
HOXC6P09630 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
HOXC6P09630 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.57■■□□□ 1.36
HOXC6P09630 AC073912.3-201ENST00000624414 853 ntBASIC23.57■■□□□ 1.36
HOXC6P09630 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.57■■□□□ 1.36
HOXC6P09630 AC068473.5-201ENST00000616428 2072 ntBASIC23.56■■□□□ 1.36
HOXC6P09630 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
HOXC6P09630 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
HOXC6P09630 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.56■■□□□ 1.36
HOXC6P09630 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
HOXC6P09630 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
HOXC6P09630 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC23.56■■□□□ 1.36
HOXC6P09630 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.56■■□□□ 1.36
HOXC6P09630 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
HOXC6P09630 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
HOXC6P09630 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
HOXC6P09630 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.56■■□□□ 1.36
HOXC6P09630 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.56■■□□□ 1.36
HOXC6P09630 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.56■■□□□ 1.36
HOXC6P09630 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
HOXC6P09630 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
HOXC6P09630 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
HOXC6P09630 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC23.56■■□□□ 1.36
HOXC6P09630 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.56■■□□□ 1.36
HOXC6P09630 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
HOXC6P09630 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.55■■□□□ 1.36
HOXC6P09630 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
HOXC6P09630 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
HOXC6P09630 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
HOXC6P09630 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
HOXC6P09630 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
HOXC6P09630 POM121L13P-201ENST00000422362 380 ntBASIC23.55■■□□□ 1.36
HOXC6P09630 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
HOXC6P09630 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.55■■□□□ 1.36
HOXC6P09630 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
HOXC6P09630 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.55■■□□□ 1.36
HOXC6P09630 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.55■■□□□ 1.36
HOXC6P09630 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.55■■□□□ 1.36
HOXC6P09630 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.55■■□□□ 1.36
HOXC6P09630 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
HOXC6P09630 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
HOXC6P09630 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
HOXC6P09630 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
HOXC6P09630 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
HOXC6P09630 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
HOXC6P09630 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
HOXC6P09630 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
HOXC6P09630 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.54■■□□□ 1.36
HOXC6P09630 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.54■■□□□ 1.36
HOXC6P09630 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.54■■□□□ 1.36
HOXC6P09630 AC105020.6-201ENST00000621523 1217 ntBASIC23.54■■□□□ 1.36
HOXC6P09630 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
HOXC6P09630 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
HOXC6P09630 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.54■■□□□ 1.36
HOXC6P09630 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
HOXC6P09630 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
HOXC6P09630 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HOXC6P09630 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
HOXC6P09630 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HOXC6P09630 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.53■■□□□ 1.36
HOXC6P09630 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
HOXC6P09630 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
HOXC6P09630 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HOXC6P09630 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.53■■□□□ 1.36
HOXC6P09630 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.53■■□□□ 1.36
HOXC6P09630 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HOXC6P09630 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HOXC6P09630 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.53■■□□□ 1.36
HOXC6P09630 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
HOXC6P09630 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.53■■□□□ 1.36
HOXC6P09630 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.53■■□□□ 1.36
HOXC6P09630 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
HOXC6P09630 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
HOXC6P09630 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.52■■□□□ 1.36
HOXC6P09630 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.52■■□□□ 1.36
HOXC6P09630 AC010542.4-201ENST00000563151 1910 ntBASIC23.52■■□□□ 1.36
HOXC6P09630 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
HOXC6P09630 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC23.52■■□□□ 1.36
HOXC6P09630 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
HOXC6P09630 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HOXC6P09630 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HOXC6P09630 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
HOXC6P09630 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HOXC6P09630 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.51■■□□□ 1.35
HOXC6P09630 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HOXC6P09630 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
HOXC6P09630 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
HOXC6P09630 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC23.51■■□□□ 1.35
HOXC6P09630 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
HOXC6P09630 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.51■■□□□ 1.35
HOXC6P09630 SNORA78-201ENST00000459373 127 ntBASIC23.51■■□□□ 1.35
HOXC6P09630 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms