Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.13■□□□□ 0.97
COL4A2P08572 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.13■□□□□ 0.97
COL4A2P08572 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.13■□□□□ 0.97
COL4A2P08572 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.13■□□□□ 0.97
COL4A2P08572 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL4A2P08572 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COL4A2P08572 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL4A2P08572 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.12■□□□□ 0.97
COL4A2P08572 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL4A2P08572 ECEL1P3-201ENST00000427961 737 ntBASIC21.12■□□□□ 0.97
COL4A2P08572 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.12■□□□□ 0.97
COL4A2P08572 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL4A2P08572 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.12■□□□□ 0.97
COL4A2P08572 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
COL4A2P08572 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL4A2P08572 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
COL4A2P08572 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
COL4A2P08572 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL4A2P08572 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.12■□□□□ 0.97
COL4A2P08572 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL4A2P08572 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
COL4A2P08572 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
COL4A2P08572 AC124016.1-201ENST00000609552 612 ntBASIC21.12■□□□□ 0.97
COL4A2P08572 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL4A2P08572 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL4A2P08572 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL4A2P08572 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL4A2P08572 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL4A2P08572 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL4A2P08572 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.11■□□□□ 0.97
COL4A2P08572 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL4A2P08572 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL4A2P08572 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL4A2P08572 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL4A2P08572 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.11■□□□□ 0.97
COL4A2P08572 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.11■□□□□ 0.97
COL4A2P08572 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.11■□□□□ 0.97
COL4A2P08572 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.11■□□□□ 0.97
COL4A2P08572 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL4A2P08572 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL4A2P08572 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL4A2P08572 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
COL4A2P08572 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.1■□□□□ 0.97
COL4A2P08572 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
COL4A2P08572 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.1■□□□□ 0.97
COL4A2P08572 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.1■□□□□ 0.97
COL4A2P08572 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
COL4A2P08572 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.1■□□□□ 0.97
COL4A2P08572 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.1■□□□□ 0.97
COL4A2P08572 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL4A2P08572 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL4A2P08572 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL4A2P08572 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL4A2P08572 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL4A2P08572 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL4A2P08572 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL4A2P08572 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
COL4A2P08572 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
COL4A2P08572 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL4A2P08572 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL4A2P08572 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
COL4A2P08572 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.09■□□□□ 0.97
COL4A2P08572 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL4A2P08572 AC133681.1-201ENST00000465482 601 ntBASIC21.09■□□□□ 0.97
COL4A2P08572 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
COL4A2P08572 MTDHP1-201ENST00000605323 784 ntBASIC21.09■□□□□ 0.97
COL4A2P08572 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL4A2P08572 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
COL4A2P08572 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
COL4A2P08572 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.09■□□□□ 0.97
COL4A2P08572 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL4A2P08572 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL4A2P08572 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.09■□□□□ 0.97
COL4A2P08572 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.09■□□□□ 0.97
COL4A2P08572 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
COL4A2P08572 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
COL4A2P08572 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL4A2P08572 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL4A2P08572 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL4A2P08572 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
COL4A2P08572 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
COL4A2P08572 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL4A2P08572 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL4A2P08572 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL4A2P08572 AC116050.2-201ENST00000612102 1779 ntBASIC21.08■□□□□ 0.97
COL4A2P08572 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.08■□□□□ 0.97
COL4A2P08572 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.08■□□□□ 0.97
COL4A2P08572 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.08■□□□□ 0.97
COL4A2P08572 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL4A2P08572 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.08■□□□□ 0.97
COL4A2P08572 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.08■□□□□ 0.97
COL4A2P08572 LINC01023-201ENST00000606054 436 ntBASIC21.08■□□□□ 0.97
COL4A2P08572 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL4A2P08572 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
COL4A2P08572 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
COL4A2P08572 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.08■□□□□ 0.96
COL4A2P08572 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.08■□□□□ 0.96
COL4A2P08572 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL4A2P08572 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL4A2P08572 BX088651.1-201ENST00000540551 451 ntBASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms