Protein–RNA interactions for Protein: P04819

CDC9, DNA ligase 1, yeastyeast

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC9P04819 SPC19YDR201W 498 nt3.64□□□□□ -1.83
CDC9P04819 PET54YGR222W 882 nt3.64□□□□□ -1.83
CDC9P04819 YAL037WYAL037W 804 nt3.64□□□□□ -1.83
CDC9P04819 RAD33YML011C 534 nt3.64□□□□□ -1.83
CDC9P04819 OST6YML019W 999 nt3.64□□□□□ -1.83
CDC9P04819 TIF11YMR260C 462 nt3.64□□□□□ -1.83
CDC9P04819 YOL159CYOL159C 516 nt3.64□□□□□ -1.83
CDC9P04819 RAD4YER162C 2265 nt3.63□□□□□ -1.83
CDC9P04819 YER079WYER079W 633 nt3.63□□□□□ -1.83
CDC9P04819 YGL042CYGL042C 306 nt3.63□□□□□ -1.83
CDC9P04819 RPB9YGL070C 369 nt3.63□□□□□ -1.83
CDC9P04819 YGR017WYGR017W 894 nt3.63□□□□□ -1.83
CDC9P04819 GEP4YHR100C 558 nt3.63□□□□□ -1.83
CDC9P04819 SGN1YIR001C 753 nt3.63□□□□□ -1.83
CDC9P04819 YAR047CYAR047C 321 nt3.63□□□□□ -1.83
CDC9P04819 CDC123YLR215C 1083 nt3.63□□□□□ -1.83
CDC9P04819 RPS23BYPR132W 438 nt3.63□□□□□ -1.83
CDC9P04819 MSH2YOL090W 2895 nt3.63□□□□□ -1.83
CDC9P04819 ALY1YKR021W 2748 nt3.62□□□□□ -1.83
CDC9P04819 YMR018WYMR018W 1545 nt3.62□□□□□ -1.83
CDC9P04819 HSP30YCR021C 999 nt3.62□□□□□ -1.83
CDC9P04819 IES6YEL044W 501 nt3.62□□□□□ -1.83
CDC9P04819 YER135CYER135C 393 nt3.62□□□□□ -1.83
CDC9P04819 IGO2YHR132W-A 396 nt3.62□□□□□ -1.83
CDC9P04819 PKR1YMR123W 369 nt3.62□□□□□ -1.83
CDC9P04819 HHF2YNL030W 312 nt3.62□□□□□ -1.83
CDC9P04819 RPL23AYBL087C 414 nt3.62□□□□□ -1.83
CDC9P04819 NGL1YOL042W 1092 nt3.62□□□□□ -1.83
CDC9P04819 PFY1YOR122C 381 nt3.62□□□□□ -1.83
CDC9P04819 SKN7YHR206W 1869 nt3.62□□□□□ -1.83
CDC9P04819 MNT3YIL014W 1893 nt3.62□□□□□ -1.83
CDC9P04819 ETP1YHL010C 1758 nt3.61□□□□□ -1.83
CDC9P04819 ATP22YDR350C 2055 nt3.61□□□□□ -1.83
CDC9P04819 KIN4YOR233W 2403 nt3.61□□□□□ -1.83
CDC9P04819 YCR081C-AYCR081C-A 237 nt3.61□□□□□ -1.83
CDC9P04819 YHR138CYHR138C 345 nt3.61□□□□□ -1.83
CDC9P04819 FLD1YLR404W 858 nt3.61□□□□□ -1.83
CDC9P04819 YML116W-AYML116W-A 303 nt3.61□□□□□ -1.83
CDC9P04819 YPR077CYPR077C 372 nt3.61□□□□□ -1.83
CDC9P04819 MLH2YLR035C 2088 nt3.61□□□□□ -1.83
CDC9P04819 SRC1YML034W 2505 nt3.61□□□□□ -1.83
CDC9P04819 ARK1YNL020C 1917 nt3.6□□□□□ -1.83
CDC9P04819 MGT1YDL200C 567 nt3.6□□□□□ -1.83
CDC9P04819 YER087C-AYER087C-A 552 nt3.6□□□□□ -1.83
CDC9P04819 YGR051CYGR051C 324 nt3.6□□□□□ -1.83
CDC9P04819 MRPL38YKL170W 417 nt3.6□□□□□ -1.83
CDC9P04819 RMP1YLR145W 606 nt3.6□□□□□ -1.83
CDC9P04819 TVP18YMR071C 504 nt3.6□□□□□ -1.83
CDC9P04819 YNL179CYNL179C 438 nt3.6□□□□□ -1.83
CDC9P04819 YOR293C-AYOR293C-A 150 nt3.6□□□□□ -1.83
CDC9P04819 IRC16YPR038W 360 nt3.6□□□□□ -1.83
CDC9P04819 MSS18YPR134W 807 nt3.6□□□□□ -1.83
CDC9P04819 FAA2YER015W 2235 nt3.6□□□□□ -1.83
CDC9P04819 SDP1YIL113W 630 nt3.59□□□□□ -1.83
CDC9P04819 YKL162C-AYKL162C-A 153 nt3.59□□□□□ -1.83
CDC9P04819 IRC19YLL033W 693 nt3.59□□□□□ -1.83
CDC9P04819 CMC2YBL059C-A 330 nt3.59□□□□□ -1.83
CDC9P04819 YBR012CYBR012C 420 nt3.59□□□□□ -1.83
CDC9P04819 MTC4YBR255W 2085 nt3.59□□□□□ -1.83
CDC9P04819 SPE1YKL184W 1401 nt3.59□□□□□ -1.84
CDC9P04819 BYE1YKL005C 1785 nt3.58□□□□□ -1.84
CDC9P04819 MYO5YMR109W 3660 nt3.58□□□□□ -1.84
CDC9P04819 DAS1YJL149W 1992 nt3.58□□□□□ -1.84
CDC9P04819 YGR027W-BYGR027W-B 5268 nt3.58□□□□□ -1.84
CDC9P04819 YLR227W-BYLR227W-B 5268 nt3.58□□□□□ -1.84
CDC9P04819 YPR158C-DYPR158C-D 5268 nt3.58□□□□□ -1.84
CDC9P04819 TRK1YJL129C 3708 nt3.58□□□□□ -1.84
CDC9P04819 IRC9YJL142C 393 nt3.58□□□□□ -1.84
CDC9P04819 LSM8YJR022W 330 nt3.58□□□□□ -1.84
CDC9P04819 YNL058CYNL058C 951 nt3.58□□□□□ -1.84
CDC9P04819 HSP10YOR020C 321 nt3.58□□□□□ -1.84
CDC9P04819 YOR053WYOR053W 342 nt3.58□□□□□ -1.84
CDC9P04819 BNI4YNL233W 2679 nt3.58□□□□□ -1.84
CDC9P04819 UTP13YLR222C 2454 nt3.58□□□□□ -1.84
CDC9P04819 CWH43YCR017C 2862 nt3.57□□□□□ -1.84
CDC9P04819 VPS3YDR495C 3036 nt3.57□□□□□ -1.84
CDC9P04819 SMB1YER029C 591 nt3.57□□□□□ -1.84
CDC9P04819 LIF1YGL090W 1266 nt3.57□□□□□ -1.84
CDC9P04819 YAL068W-AYAL068W-A 255 nt3.57□□□□□ -1.84
CDC9P04819 RAD5YLR032W 3510 nt3.57□□□□□ -1.84
CDC9P04819 YLR302CYLR302C 363 nt3.57□□□□□ -1.84
CDC9P04819 NMA111YNL123W 2994 nt3.57□□□□□ -1.84
CDC9P04819 YLR001CYLR001C 2589 nt3.57□□□□□ -1.84
CDC9P04819 TCB3YML072C 4638 nt3.56□□□□□ -1.84
CDC9P04819 PMT6YGR199W 2280 nt3.56□□□□□ -1.84
CDC9P04819 STN1YDR082W 1485 nt3.56□□□□□ -1.84
CDC9P04819 SIZ1YDR409W 2715 nt3.56□□□□□ -1.84
CDC9P04819 ZDS1YMR273C 2748 nt3.56□□□□□ -1.84
CDC9P04819 YER038W-AYER038W-A 381 nt3.56□□□□□ -1.84
CDC9P04819 RPS23AYGR118W 438 nt3.56□□□□□ -1.84
CDC9P04819 NBL1YHR199C-A 222 nt3.56□□□□□ -1.84
CDC9P04819 TPM2YIL138C 486 nt3.56□□□□□ -1.84
CDC9P04819 AIM26YKL037W 357 nt3.56□□□□□ -1.84
CDC9P04819 HHT2YNL031C 411 nt3.56□□□□□ -1.84
CDC9P04819 USA1YML029W 2517 nt3.56□□□□□ -1.84
CDC9P04819 BIK1YCL029C 1323 nt3.55□□□□□ -1.84
CDC9P04819 TCD1YHR003C 1290 nt3.55□□□□□ -1.84
CDC9P04819 YPL034WYPL034W 498 nt3.55□□□□□ -1.84
CDC9P04819 YPL080CYPL080C 327 nt3.55□□□□□ -1.84
CDC9P04819 ROD1YOR018W 2514 nt3.54□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 29.5 ms