Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
APOEP02649 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.7■■□□□ 1.07
APOEP02649 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
APOEP02649 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.7■■□□□ 1.07
APOEP02649 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
APOEP02649 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
APOEP02649 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
APOEP02649 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
APOEP02649 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
APOEP02649 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.7■■□□□ 1.06
APOEP02649 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
APOEP02649 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.7■■□□□ 1.06
APOEP02649 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.7■■□□□ 1.06
APOEP02649 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
APOEP02649 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
APOEP02649 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.7■■□□□ 1.06
APOEP02649 AL024507.2-201ENST00000606070 2574 ntBASIC21.7■■□□□ 1.06
APOEP02649 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
APOEP02649 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.7■■□□□ 1.06
APOEP02649 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
APOEP02649 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.69■■□□□ 1.06
APOEP02649 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
APOEP02649 AC245052.3-201ENST00000450182 901 ntBASIC21.69■■□□□ 1.06
APOEP02649 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.69■■□□□ 1.06
APOEP02649 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.69■■□□□ 1.06
APOEP02649 DUX4L16-201ENST00000555130 1264 ntBASIC21.69■■□□□ 1.06
APOEP02649 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.69■■□□□ 1.06
APOEP02649 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.69■■□□□ 1.06
APOEP02649 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.69■■□□□ 1.06
APOEP02649 AC231657.2-201ENST00000624556 255 ntBASIC21.69■■□□□ 1.06
APOEP02649 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.69■■□□□ 1.06
APOEP02649 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
APOEP02649 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
APOEP02649 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
APOEP02649 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
APOEP02649 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
APOEP02649 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
APOEP02649 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
APOEP02649 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
APOEP02649 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
APOEP02649 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
APOEP02649 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
APOEP02649 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.68■■□□□ 1.06
APOEP02649 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
APOEP02649 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.68■■□□□ 1.06
APOEP02649 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.68■■□□□ 1.06
APOEP02649 CDCA4P2-201ENST00000441182 718 ntBASIC21.68■■□□□ 1.06
APOEP02649 TERF1P5-201ENST00000477545 1207 ntBASIC21.68■■□□□ 1.06
APOEP02649 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.68■■□□□ 1.06
APOEP02649 AC013268.1-206ENST00000638368 961 ntBASIC21.68■■□□□ 1.06
APOEP02649 AC112229.1-201ENST00000639295 961 ntBASIC21.68■■□□□ 1.06
APOEP02649 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
APOEP02649 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
APOEP02649 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
APOEP02649 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
APOEP02649 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
APOEP02649 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.68■■□□□ 1.06
APOEP02649 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
APOEP02649 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
APOEP02649 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.67■■□□□ 1.06
APOEP02649 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
APOEP02649 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
APOEP02649 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
APOEP02649 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.67■■□□□ 1.06
APOEP02649 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.67■■□□□ 1.06
APOEP02649 AC026185.1-201ENST00000445748 174 ntBASIC21.67■■□□□ 1.06
APOEP02649 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.67■■□□□ 1.06
APOEP02649 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
APOEP02649 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
APOEP02649 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.67■■□□□ 1.06
APOEP02649 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
APOEP02649 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.67■■□□□ 1.06
APOEP02649 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.67■■□□□ 1.06
APOEP02649 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
APOEP02649 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
APOEP02649 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
APOEP02649 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
APOEP02649 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
APOEP02649 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
APOEP02649 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.66■■□□□ 1.06
APOEP02649 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.66■■□□□ 1.06
APOEP02649 AC007322.1-201ENST00000426983 750 ntBASIC21.66■■□□□ 1.06
APOEP02649 AC090192.1-201ENST00000517740 490 ntBASIC21.66■■□□□ 1.06
APOEP02649 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.66■■□□□ 1.06
APOEP02649 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.66■■□□□ 1.06
APOEP02649 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
APOEP02649 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
APOEP02649 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
APOEP02649 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
APOEP02649 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.65■■□□□ 1.06
APOEP02649 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
APOEP02649 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
APOEP02649 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
APOEP02649 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
APOEP02649 RBM17P2-201ENST00000616397 1405 ntBASIC21.65■■□□□ 1.06
APOEP02649 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
APOEP02649 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.65■■□□□ 1.06
APOEP02649 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
APOEP02649 AC243732.1-201ENST00000612648 864 ntBASIC21.65■■□□□ 1.06
APOEP02649 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms