Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRUB2O95900 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
TRUB2O95900 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.75■■□□□ 1.07
TRUB2O95900 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.75■■□□□ 1.07
TRUB2O95900 DUX4L16-201ENST00000555130 1264 ntBASIC21.75■■□□□ 1.07
TRUB2O95900 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.75■■□□□ 1.07
TRUB2O95900 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.75■■□□□ 1.07
TRUB2O95900 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.75■■□□□ 1.07
TRUB2O95900 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TRUB2O95900 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRUB2O95900 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.75■■□□□ 1.07
TRUB2O95900 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRUB2O95900 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRUB2O95900 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRUB2O95900 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRUB2O95900 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRUB2O95900 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRUB2O95900 RBM17P2-201ENST00000616397 1405 ntBASIC21.74■■□□□ 1.07
TRUB2O95900 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.74■■□□□ 1.07
TRUB2O95900 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.74■■□□□ 1.07
TRUB2O95900 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.74■■□□□ 1.07
TRUB2O95900 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRUB2O95900 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRUB2O95900 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRUB2O95900 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRUB2O95900 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRUB2O95900 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRUB2O95900 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRUB2O95900 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRUB2O95900 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TRUB2O95900 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRUB2O95900 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRUB2O95900 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.73■■□□□ 1.07
TRUB2O95900 TERF1P5-201ENST00000477545 1207 ntBASIC21.73■■□□□ 1.07
TRUB2O95900 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRUB2O95900 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRUB2O95900 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TRUB2O95900 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
TRUB2O95900 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRUB2O95900 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRUB2O95900 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRUB2O95900 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRUB2O95900 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.73■■□□□ 1.07
TRUB2O95900 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.72■■□□□ 1.07
TRUB2O95900 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
TRUB2O95900 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRUB2O95900 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
TRUB2O95900 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRUB2O95900 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.72■■□□□ 1.07
TRUB2O95900 AC245052.3-201ENST00000450182 901 ntBASIC21.72■■□□□ 1.07
TRUB2O95900 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TRUB2O95900 AC243732.1-201ENST00000612648 864 ntBASIC21.72■■□□□ 1.07
TRUB2O95900 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
TRUB2O95900 RARRES2P11-201ENST00000635158 484 ntBASIC21.72■■□□□ 1.07
TRUB2O95900 AC073111.5-205ENST00000641717 521 ntBASIC21.72■■□□□ 1.07
TRUB2O95900 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRUB2O95900 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRUB2O95900 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.72■■□□□ 1.07
TRUB2O95900 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRUB2O95900 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRUB2O95900 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRUB2O95900 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
TRUB2O95900 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRUB2O95900 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRUB2O95900 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
TRUB2O95900 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.71■■□□□ 1.07
TRUB2O95900 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TRUB2O95900 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRUB2O95900 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.71■■□□□ 1.07
TRUB2O95900 CDCA4P2-201ENST00000441182 718 ntBASIC21.71■■□□□ 1.07
TRUB2O95900 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.71■■□□□ 1.07
TRUB2O95900 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.71■■□□□ 1.07
TRUB2O95900 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TRUB2O95900 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.71■■□□□ 1.07
TRUB2O95900 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRUB2O95900 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.07
TRUB2O95900 PLK5-205ENST00000642079 1969 ntBASIC21.7■■□□□ 1.07
TRUB2O95900 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRUB2O95900 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.7■■□□□ 1.06
TRUB2O95900 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.7■■□□□ 1.06
TRUB2O95900 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRUB2O95900 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRUB2O95900 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.7■■□□□ 1.06
TRUB2O95900 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.7■■□□□ 1.06
TRUB2O95900 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.7■■□□□ 1.06
TRUB2O95900 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.7■■□□□ 1.06
TRUB2O95900 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.7■■□□□ 1.06
TRUB2O95900 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TRUB2O95900 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRUB2O95900 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRUB2O95900 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.7■■□□□ 1.06
TRUB2O95900 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRUB2O95900 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.7■■□□□ 1.06
TRUB2O95900 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRUB2O95900 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.69■■□□□ 1.06
TRUB2O95900 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRUB2O95900 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.69■■□□□ 1.06
TRUB2O95900 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRUB2O95900 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.69■■□□□ 1.06
TRUB2O95900 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms