Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.6■□□□□ 0.73
URB1O60287 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.6■□□□□ 0.73
URB1O60287 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
URB1O60287 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
URB1O60287 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.6■□□□□ 0.73
URB1O60287 ANOS2P-203ENST00000472227 1816 ntBASIC19.6■□□□□ 0.73
URB1O60287 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.6■□□□□ 0.73
URB1O60287 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
URB1O60287 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
URB1O60287 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
URB1O60287 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.6■□□□□ 0.73
URB1O60287 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.6■□□□□ 0.73
URB1O60287 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.6■□□□□ 0.73
URB1O60287 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
URB1O60287 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
URB1O60287 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
URB1O60287 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
URB1O60287 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
URB1O60287 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
URB1O60287 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
URB1O60287 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
URB1O60287 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.59■□□□□ 0.73
URB1O60287 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.59■□□□□ 0.73
URB1O60287 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.59■□□□□ 0.73
URB1O60287 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.59■□□□□ 0.73
URB1O60287 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
URB1O60287 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
URB1O60287 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
URB1O60287 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
URB1O60287 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
URB1O60287 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
URB1O60287 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
URB1O60287 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
URB1O60287 MCRIP2P1-201ENST00000394346 511 ntBASIC19.59■□□□□ 0.73
URB1O60287 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.59■□□□□ 0.73
URB1O60287 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.59■□□□□ 0.73
URB1O60287 AC124016.1-201ENST00000609552 612 ntBASIC19.59■□□□□ 0.73
URB1O60287 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
URB1O60287 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
URB1O60287 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
URB1O60287 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.58■□□□□ 0.73
URB1O60287 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
URB1O60287 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
URB1O60287 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.58■□□□□ 0.73
URB1O60287 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.58■□□□□ 0.73
URB1O60287 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
URB1O60287 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
URB1O60287 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
URB1O60287 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
URB1O60287 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
URB1O60287 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
URB1O60287 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
URB1O60287 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
URB1O60287 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
URB1O60287 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
URB1O60287 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
URB1O60287 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
URB1O60287 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.58■□□□□ 0.72
URB1O60287 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
URB1O60287 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
URB1O60287 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
URB1O60287 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.57■□□□□ 0.72
URB1O60287 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.57■□□□□ 0.72
URB1O60287 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
URB1O60287 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.57■□□□□ 0.72
URB1O60287 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
URB1O60287 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.57■□□□□ 0.72
URB1O60287 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.57■□□□□ 0.72
URB1O60287 AC092865.7-201ENST00000641832 219 ntBASIC19.57■□□□□ 0.72
URB1O60287 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
URB1O60287 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
URB1O60287 C9orf163-202ENST00000624034 2573 ntBASIC19.57■□□□□ 0.72
URB1O60287 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
URB1O60287 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
URB1O60287 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
URB1O60287 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
URB1O60287 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
URB1O60287 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
URB1O60287 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
URB1O60287 AL023875.1-201ENST00000640777 796 ntBASIC19.56■□□□□ 0.72
URB1O60287 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
URB1O60287 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
URB1O60287 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
URB1O60287 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
URB1O60287 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
URB1O60287 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.56■□□□□ 0.72
URB1O60287 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.56■□□□□ 0.72
URB1O60287 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.56■□□□□ 0.72
URB1O60287 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
URB1O60287 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.56■□□□□ 0.72
URB1O60287 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
URB1O60287 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
URB1O60287 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
URB1O60287 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
URB1O60287 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.56■□□□□ 0.72
URB1O60287 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
URB1O60287 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.56■□□□□ 0.72
URB1O60287 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
URB1O60287 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
URB1O60287 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms