Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
ATP2A1O14983 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.82■■□□□ 1.4
ATP2A1O14983 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.81■■□□□ 1.4
ATP2A1O14983 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATP2A1O14983 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATP2A1O14983 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATP2A1O14983 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATP2A1O14983 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATP2A1O14983 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATP2A1O14983 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATP2A1O14983 AC098590.1-201ENST00000468126 897 ntBASIC23.81■■□□□ 1.4
ATP2A1O14983 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATP2A1O14983 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATP2A1O14983 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ATP2A1O14983 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.8■■□□□ 1.4
ATP2A1O14983 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATP2A1O14983 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATP2A1O14983 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ATP2A1O14983 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.8■■□□□ 1.4
ATP2A1O14983 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATP2A1O14983 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.8■■□□□ 1.4
ATP2A1O14983 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC23.8■■□□□ 1.4
ATP2A1O14983 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
ATP2A1O14983 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATP2A1O14983 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
ATP2A1O14983 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
ATP2A1O14983 IRX5-204ENST00000560154 879 ntTSL 5 BASIC23.8■■□□□ 1.4
ATP2A1O14983 AC060766.5-201ENST00000590539 871 ntBASIC23.8■■□□□ 1.4
ATP2A1O14983 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ATP2A1O14983 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ATP2A1O14983 CYP21A1P-202ENST00000354927 1481 ntBASIC23.8■■□□□ 1.4
ATP2A1O14983 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
ATP2A1O14983 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
ATP2A1O14983 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ATP2A1O14983 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATP2A1O14983 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATP2A1O14983 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATP2A1O14983 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATP2A1O14983 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATP2A1O14983 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ATP2A1O14983 AP003097.1-201ENST00000530657 1135 ntBASIC23.79■■□□□ 1.4
ATP2A1O14983 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.79■■□□□ 1.4
ATP2A1O14983 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.79■■□□□ 1.4
ATP2A1O14983 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATP2A1O14983 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ATP2A1O14983 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.79■■□□□ 1.4
ATP2A1O14983 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.79■■□□□ 1.4
ATP2A1O14983 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
ATP2A1O14983 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.79■■□□□ 1.4
ATP2A1O14983 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATP2A1O14983 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ATP2A1O14983 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.79■■□□□ 1.4
ATP2A1O14983 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATP2A1O14983 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
ATP2A1O14983 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATP2A1O14983 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.78■■□□□ 1.4
ATP2A1O14983 GUSBP5-202ENST00000510805 1989 ntBASIC23.78■■□□□ 1.4
ATP2A1O14983 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATP2A1O14983 GCSHP5-201ENST00000443090 522 ntBASIC23.78■■□□□ 1.4
ATP2A1O14983 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
ATP2A1O14983 AC006058.3-201ENST00000606217 1069 ntBASIC23.78■■□□□ 1.4
ATP2A1O14983 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATP2A1O14983 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATP2A1O14983 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.78■■□□□ 1.4
ATP2A1O14983 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ATP2A1O14983 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATP2A1O14983 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.78■■□□□ 1.4
ATP2A1O14983 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ATP2A1O14983 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.78■■□□□ 1.4
ATP2A1O14983 AC116050.2-201ENST00000612102 1779 ntBASIC23.78■■□□□ 1.4
ATP2A1O14983 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ATP2A1O14983 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ATP2A1O14983 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
ATP2A1O14983 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
ATP2A1O14983 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.77■■□□□ 1.4
ATP2A1O14983 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ATP2A1O14983 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.77■■□□□ 1.4
ATP2A1O14983 AC128676.1-201ENST00000454392 318 ntBASIC23.77■■□□□ 1.4
ATP2A1O14983 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ATP2A1O14983 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ATP2A1O14983 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.77■■□□□ 1.4
ATP2A1O14983 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ATP2A1O14983 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC23.77■■□□□ 1.4
ATP2A1O14983 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ATP2A1O14983 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ATP2A1O14983 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ATP2A1O14983 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ATP2A1O14983 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
ATP2A1O14983 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.76■■□□□ 1.39
ATP2A1O14983 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
ATP2A1O14983 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
ATP2A1O14983 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
ATP2A1O14983 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.76■■□□□ 1.39
ATP2A1O14983 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ATP2A1O14983 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ATP2A1O14983 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.76■■□□□ 1.39
ATP2A1O14983 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
ATP2A1O14983 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.76■■□□□ 1.39
ATP2A1O14983 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
ATP2A1O14983 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms