Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.66■□□□□ 0.74
UPK1AO00322 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
UPK1AO00322 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPK1AO00322 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPK1AO00322 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UPK1AO00322 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UPK1AO00322 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.65■□□□□ 0.74
UPK1AO00322 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
UPK1AO00322 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.65■□□□□ 0.74
UPK1AO00322 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
UPK1AO00322 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.65■□□□□ 0.74
UPK1AO00322 TERF1P2-201ENST00000583350 1212 ntBASIC19.65■□□□□ 0.74
UPK1AO00322 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
UPK1AO00322 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
UPK1AO00322 KRT87P-202ENST00000534226 1464 ntBASIC19.65■□□□□ 0.74
UPK1AO00322 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.65■□□□□ 0.74
UPK1AO00322 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UPK1AO00322 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.65■□□□□ 0.74
UPK1AO00322 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UPK1AO00322 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
UPK1AO00322 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
UPK1AO00322 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UPK1AO00322 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
UPK1AO00322 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
UPK1AO00322 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
UPK1AO00322 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.64■□□□□ 0.74
UPK1AO00322 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPK1AO00322 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
UPK1AO00322 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.64■□□□□ 0.73
UPK1AO00322 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.64■□□□□ 0.73
UPK1AO00322 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPK1AO00322 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPK1AO00322 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.64■□□□□ 0.73
UPK1AO00322 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.64■□□□□ 0.73
UPK1AO00322 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
UPK1AO00322 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPK1AO00322 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
UPK1AO00322 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UPK1AO00322 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
UPK1AO00322 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.64■□□□□ 0.73
UPK1AO00322 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPK1AO00322 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPK1AO00322 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPK1AO00322 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
UPK1AO00322 RNF165-205ENST00000588679 2904 ntBASIC19.64■□□□□ 0.73
UPK1AO00322 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPK1AO00322 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPK1AO00322 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPK1AO00322 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.63■□□□□ 0.73
UPK1AO00322 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UPK1AO00322 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPK1AO00322 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPK1AO00322 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPK1AO00322 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPK1AO00322 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UPK1AO00322 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPK1AO00322 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.63■□□□□ 0.73
UPK1AO00322 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UPK1AO00322 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.63■□□□□ 0.73
UPK1AO00322 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.63■□□□□ 0.73
UPK1AO00322 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.63■□□□□ 0.73
UPK1AO00322 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
UPK1AO00322 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPK1AO00322 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UPK1AO00322 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UPK1AO00322 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
UPK1AO00322 AC006128.1-201ENST00000624704 1661 ntBASIC19.62■□□□□ 0.73
UPK1AO00322 AFG3L1P-217ENST00000557444 2447 ntBASIC19.62■□□□□ 0.73
UPK1AO00322 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.62■□□□□ 0.73
UPK1AO00322 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPK1AO00322 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UPK1AO00322 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.62■□□□□ 0.73
UPK1AO00322 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
UPK1AO00322 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.62■□□□□ 0.73
UPK1AO00322 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.62■□□□□ 0.73
UPK1AO00322 CCDC92B-201ENST00000575506 885 ntBASIC19.62■□□□□ 0.73
UPK1AO00322 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPK1AO00322 AL391422.3-201ENST00000603791 2761 ntBASIC19.62■□□□□ 0.73
UPK1AO00322 PLK5-205ENST00000642079 1969 ntBASIC19.62■□□□□ 0.73
UPK1AO00322 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UPK1AO00322 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPK1AO00322 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPK1AO00322 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPK1AO00322 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.61■□□□□ 0.73
UPK1AO00322 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UPK1AO00322 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.61■□□□□ 0.73
UPK1AO00322 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.61■□□□□ 0.73
UPK1AO00322 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPK1AO00322 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UPK1AO00322 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UPK1AO00322 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPK1AO00322 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UPK1AO00322 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPK1AO00322 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UPK1AO00322 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
UPK1AO00322 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UPK1AO00322 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UPK1AO00322 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.61■□□□□ 0.73
UPK1AO00322 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.6■□□□□ 0.73
UPK1AO00322 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms