Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC092535.2-201ENST00000513176 1204 ntBASIC10.3□□□□□ -0.76
SLC1A1P43005 AC124242.2-201ENST00000517431 1119 ntBASIC10.3□□□□□ -0.76
SLC1A1P43005 DBI-208ENST00000535617 654 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SLC1A1P43005 AL662844.2-201ENST00000538455 284 ntBASIC10.3□□□□□ -0.76
SLC1A1P43005 AL163195.2-203ENST00000553604 573 ntTSL 4 BASIC10.3□□□□□ -0.76
SLC1A1P43005 AC090515.5-201ENST00000560378 526 ntTSL 5 BASIC10.3□□□□□ -0.76
SLC1A1P43005 BEAN1-AS1-203ENST00000569125 530 ntTSL 4 BASIC10.3□□□□□ -0.76
SLC1A1P43005 AC137761.1-201ENST00000569859 601 ntTSL 5 BASIC10.3□□□□□ -0.76
SLC1A1P43005 AC002551.1-201ENST00000569881 592 ntTSL 3 BASIC10.3□□□□□ -0.76
SLC1A1P43005 AC006504.5-205ENST00000588318 432 ntTSL 3 BASIC10.3□□□□□ -0.76
SLC1A1P43005 TTN-AS1-236ENST00000590040 855 ntTSL 5 BASIC10.3□□□□□ -0.76
SLC1A1P43005 AC010636.2-201ENST00000595094 522 ntTSL 5 BASIC10.3□□□□□ -0.76
SLC1A1P43005 MAGOH3P-201ENST00000605130 447 ntBASIC10.3□□□□□ -0.76
SLC1A1P43005 AL357518.1-201ENST00000607169 430 ntBASIC10.3□□□□□ -0.76
SLC1A1P43005 ZNF761-205ENST00000613950 646 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SLC1A1P43005 IGHV3-54-201ENST00000622166 353 ntBASIC10.3□□□□□ -0.76
SLC1A1P43005 AC005609.3-201ENST00000624566 577 ntBASIC10.3□□□□□ -0.76
SLC1A1P43005 ZC3H6-201ENST00000343936 11539 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
SLC1A1P43005 AC104825.2-201ENST00000505448 3249 ntBASIC10.3□□□□□ -0.76
SLC1A1P43005 PREPL-202ENST00000378511 2315 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SLC1A1P43005 NOTCH2-201ENST00000256646 11389 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SLC1A1P43005 AC005005.3-201ENST00000609017 1410 ntBASIC10.3□□□□□ -0.76
SLC1A1P43005 GLRA1-201ENST00000274576 1803 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
SLC1A1P43005 LINC00898-201ENST00000380990 4185 ntTSL 2 BASIC10.3□□□□□ -0.76
SLC1A1P43005 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SLC1A1P43005 DDHD1-210ENST00000612692 12339 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
SLC1A1P43005 MAPK10-382ENST00000642023 2369 ntBASIC10.3□□□□□ -0.76
SLC1A1P43005 NBPF7-201ENST00000445758 1326 ntBASIC10.3□□□□□ -0.76
SLC1A1P43005 PPHLN1-203ENST00000337898 1465 ntTSL 2 BASIC10.3□□□□□ -0.76
SLC1A1P43005 AC010595.1-201ENST00000507387 1453 ntBASIC10.3□□□□□ -0.76
SLC1A1P43005 FAM161B-201ENST00000286544 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SLC1A1P43005 WDR20-201ENST00000299135 2198 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SLC1A1P43005 ZSCAN9-202ENST00000425468 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SLC1A1P43005 STXBP5L-204ENST00000471454 3813 ntAPPRIS ALT1 TSL 2 BASIC10.29□□□□□ -0.76
SLC1A1P43005 AKNAD1-201ENST00000369994 2318 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
SLC1A1P43005 SYNE1-230ENST00000495090 1907 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SLC1A1P43005 SALL2-201ENST00000450879 3178 ntTSL 2 BASIC10.29□□□□□ -0.76
SLC1A1P43005 GPLD1-201ENST00000230036 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SLC1A1P43005 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SLC1A1P43005 SLC25A14-214ENST00000545805 1650 ntTSL 5 BASIC10.29□□□□□ -0.76
SLC1A1P43005 SPATA31D4-201ENST00000419782 4787 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SLC1A1P43005 SUN1-205ENST00000405266 4062 ntTSL 5 BASIC10.29□□□□□ -0.76
SLC1A1P43005 SVILP1-201ENST00000422642 2676 ntBASIC10.29□□□□□ -0.76
SLC1A1P43005 ZSCAN26-207ENST00000623276 1998 ntAPPRIS P2 TSL 3 BASIC10.29□□□□□ -0.76
SLC1A1P43005 MIA-201ENST00000263369 632 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SLC1A1P43005 SUMO2-201ENST00000314523 809 ntTSL 2 BASIC10.29□□□□□ -0.76
SLC1A1P43005 ENSA-202ENST00000339643 633 ntTSL 2 BASIC10.29□□□□□ -0.76
SLC1A1P43005 NDUFB5P2-201ENST00000398690 566 ntBASIC10.29□□□□□ -0.76
SLC1A1P43005 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SLC1A1P43005 MESTP4-201ENST00000412333 1204 ntBASIC10.29□□□□□ -0.76
SLC1A1P43005 AC002511.1-201ENST00000428426 1000 ntTSL 5 BASIC10.29□□□□□ -0.76
SLC1A1P43005 AL606469.1-201ENST00000443224 892 ntTSL 2 BASIC10.29□□□□□ -0.76
SLC1A1P43005 AC005020.1-201ENST00000455459 526 ntBASIC10.29□□□□□ -0.76
SLC1A1P43005 CCDC162P-207ENST00000473454 547 ntTSL 4 BASIC10.29□□□□□ -0.76
SLC1A1P43005 RPL12P33-201ENST00000485633 492 ntBASIC10.29□□□□□ -0.76
SLC1A1P43005 AC025171.2-202ENST00000505541 402 ntTSL 5 BASIC10.29□□□□□ -0.76
SLC1A1P43005 AC090579.1-201ENST00000518591 504 ntTSL 4 BASIC10.29□□□□□ -0.76
SLC1A1P43005 BIN3-207ENST00000520292 775 ntTSL 5 BASIC10.29□□□□□ -0.76
SLC1A1P43005 MRPL2P1-201ENST00000546688 919 ntBASIC10.29□□□□□ -0.76
SLC1A1P43005 AL157912.1-201ENST00000554245 548 ntTSL 4 BASIC10.29□□□□□ -0.76
SLC1A1P43005 DPPA5P2-201ENST00000561451 299 ntBASIC10.29□□□□□ -0.76
SLC1A1P43005 AL807752.5-201ENST00000569497 820 ntBASIC10.29□□□□□ -0.76
SLC1A1P43005 CD226-202ENST00000577287 1009 ntTSL 3 BASIC10.29□□□□□ -0.76
SLC1A1P43005 RN7SL663P-201ENST00000578592 299 ntBASIC10.29□□□□□ -0.76
SLC1A1P43005 SMURF2P1-202ENST00000579301 570 ntTSL 5 BASIC10.29□□□□□ -0.76
SLC1A1P43005 AF038458.2-201ENST00000587412 600 ntTSL 3 BASIC10.29□□□□□ -0.76
SLC1A1P43005 HNRNPA3P16-201ENST00000591842 1016 ntBASIC10.29□□□□□ -0.76
SLC1A1P43005 MIA-203ENST00000594436 507 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
SLC1A1P43005 AC011466.2-201ENST00000594589 359 ntTSL 5 BASIC10.29□□□□□ -0.76
SLC1A1P43005 ZNF548-207ENST00000597400 589 ntTSL 3 BASIC10.29□□□□□ -0.76
SLC1A1P43005 U47924.3-201ENST00000610699 461 ntBASIC10.29□□□□□ -0.76
SLC1A1P43005 MTOR-201ENST00000361445 8677 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SLC1A1P43005 KRTAP16-1-201ENST00000391352 1554 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
SLC1A1P43005 GPHN-201ENST00000315266 4193 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SLC1A1P43005 AC074194.2-201ENST00000636429 2348 ntBASIC10.29□□□□□ -0.76
SLC1A1P43005 COL4A6-202ENST00000372216 6570 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SLC1A1P43005 AC110048.2-201ENST00000617013 6721 ntBASIC10.29□□□□□ -0.76
SLC1A1P43005 COL11A1-201ENST00000353414 7173 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
SLC1A1P43005 NUDT21-201ENST00000300291 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SLC1A1P43005 JKAMP-203ENST00000425728 1636 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SLC1A1P43005 DSG1-201ENST00000257192 5045 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SLC1A1P43005 AC091962.1-201ENST00000561496 1765 ntBASIC10.29□□□□□ -0.76
SLC1A1P43005 MSL3-202ENST00000337339 3446 ntTSL 2 BASIC10.29□□□□□ -0.76
SLC1A1P43005 TBC1D14-206ENST00000446947 4021 ntTSL 5 BASIC10.29□□□□□ -0.76
SLC1A1P43005 PPP1R2-206ENST00000618156 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SLC1A1P43005 KIAA0100-202ENST00000528896 7407 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SLC1A1P43005 RBM23-204ENST00000399922 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SLC1A1P43005 PKD2L2-206ENST00000508883 2282 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SLC1A1P43005 TSEN2P1-201ENST00000513552 1387 ntBASIC10.28□□□□□ -0.76
SLC1A1P43005 LCT-201ENST00000264162 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SLC1A1P43005 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SLC1A1P43005 THUMPD1-202ENST00000396083 2624 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SLC1A1P43005 ATP1A2-201ENST00000361216 5421 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SLC1A1P43005 RSL24D1-201ENST00000260443 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SLC1A1P43005 TMEM254-AS1-201ENST00000412298 3121 ntTSL 2 BASIC10.28□□□□□ -0.76
SLC1A1P43005 SALL2-206ENST00000613414 1566 ntTSL 2 BASIC10.28□□□□□ -0.76
SLC1A1P43005 ZNF267-201ENST00000300870 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SLC1A1P43005 PTAR1-201ENST00000340434 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SLC1A1P43005 TCF4-208ENST00000543082 2399 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SLC1A1P43005 MT2P1-201ENST00000262499 183 ntBASIC10.28□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms