Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ZNF439-203ENST00000455282 2408 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 CFAP44-201ENST00000295868 3377 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 TACC2-203ENST00000358010 3815 ntTSL 5 BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 NR1I3-223ENST00000506209 1441 ntTSL 2 BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 PCBP2-223ENST00000552819 1418 ntAPPRIS ALT1 TSL 2 BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 SPOCD1-214ENST00000533231 3774 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 CUL2-204ENST00000374751 4233 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 TAF1A-202ENST00000352967 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 AC005035.1-201ENST00000627215 3727 ntTSL 2 BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 MAN1A2-201ENST00000356554 8576 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 GUCY1B3-201ENST00000264424 3124 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 SCARA3-201ENST00000301904 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 CYP2B6-201ENST00000324071 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 AC007731.2-201ENST00000426448 1703 ntBASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 COLEC10-201ENST00000332843 1266 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 XCL2-201ENST00000367819 565 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 UBB-202ENST00000395837 1014 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 FTLP2-201ENST00000431458 528 ntBASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 AC006012.1-201ENST00000436600 691 ntTSL 2 BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 TRAF3IP2-AS1-205ENST00000442928 548 ntTSL 4 BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 AL033527.1-201ENST00000446772 154 ntBASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 AL132838.1-201ENST00000469219 542 ntBASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 THAP6-210ENST00000507557 542 ntTSL 4 BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 AC079226.1-201ENST00000513255 444 ntTSL 3 BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 TSFM-209ENST00000548851 794 ntTSL 3 BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 LINC02206-201ENST00000558436 719 ntTSL 3 BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 AL136295.2-201ENST00000558478 747 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 EHD4-AS1-201ENST00000564168 771 ntTSL 3 BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 IGHV1OR16-1-201ENST00000568055 392 ntBASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 AC020904.1-201ENST00000594322 729 ntBASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 FAM229B-202ENST00000604268 598 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 AC135048.3-201ENST00000614997 328 ntBASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 HIST1H4L-201ENST00000618305 312 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 AC244093.2-201ENST00000620102 524 ntBASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 Metazoa_SRP.54-201ENST00000620533 282 ntBASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 MYOCOS-201ENST00000636697 2100 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 DAZ3-203ENST00000446723 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 DAZ2-209ENST00000449947 3372 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 UTP11-201ENST00000373014 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 GLDC-211ENST00000639318 2009 ntTSL 5 BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 TAOK1-201ENST00000261716 12407 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
NPIPA3F8WFD2 AC090197.1-202ENST00000519692 4374 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
NPIPA3F8WFD2 CD22-202ENST00000341773 2755 ntTSL 5 BASIC9.15□□□□□ -0.95
NPIPA3F8WFD2 SEL1L-201ENST00000336735 7925 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
NPIPA3F8WFD2 FXR1-207ENST00000468861 1989 ntTSL 2 BASIC9.15□□□□□ -0.95
NPIPA3F8WFD2 RRAGB-201ENST00000262850 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
NPIPA3F8WFD2 HIVEP3-201ENST00000372583 12193 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
NPIPA3F8WFD2 HSPA8-218ENST00000532636 2306 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
NPIPA3F8WFD2 CD22-205ENST00000544992 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
NPIPA3F8WFD2 AKAP2-202ENST00000374525 6866 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
NPIPA3F8WFD2 PLAC8-203ENST00000426923 2253 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
NPIPA3F8WFD2 MIGA1-201ENST00000370791 5288 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
NPIPA3F8WFD2 LIMA1-201ENST00000341247 3706 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
NPIPA3F8WFD2 NCOA7-209ENST00000444128 2978 ntTSL 5 BASIC9.15□□□□□ -0.95
NPIPA3F8WFD2 SEMA4G-201ENST00000210633 4094 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
NPIPA3F8WFD2 BPI-204ENST00000451435 2857 ntTSL 2 BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 C2orf49-201ENST00000258457 4768 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 CCDC174-206ENST00000611584 2720 ntTSL 5 BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 AMER1-201ENST00000330258 8443 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 MRVI1-217ENST00000558540 3339 ntTSL 2 BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 GALNTL6-203ENST00000506823 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 PLEKHB2-201ENST00000234115 4208 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 NEK8-201ENST00000268766 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 AL355864.1-201ENST00000401937 526 ntBASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 AC010998.1-201ENST00000414774 943 ntTSL 3 BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 AP000529.1-201ENST00000417657 1123 ntBASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 HNRNPA1P14-201ENST00000440352 935 ntBASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 SNHG14-204ENST00000441592 608 ntTSL 2 BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 AL606530.1-201ENST00000441783 1250 ntBASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 AL450405.1-201ENST00000443998 474 ntBASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 RPSAP23-201ENST00000446095 883 ntBASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 AL020996.1-202ENST00000453649 517 ntTSL 3 BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 AC131210.1-201ENST00000491347 441 ntTSL 3 BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 LRRC37A13P-201ENST00000546055 287 ntBASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 FAM174B-204ENST00000555064 621 ntAPPRIS ALT2 TSL 4 BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 AC012653.1-201ENST00000558410 931 ntBASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 AC009119.1-203ENST00000565064 577 ntTSL 4 BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 AC092123.1-201ENST00000565623 871 ntTSL 2 BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 GEMIN8P2-201ENST00000569855 700 ntBASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 USP2-AS1-204ENST00000577297 689 ntTSL 3 BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 MAGOH2P-201ENST00000580926 436 ntBASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 PCGF7P-201ENST00000595406 1051 ntBASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 AC008554.1-201ENST00000598131 811 ntTSL 3 BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 OR4E1-201ENST00000610316 900 ntAPPRIS ALT1 BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 ENPP7P7-201ENST00000611822 1102 ntBASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 AC000041.2-201ENST00000619824 151 ntBASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 ALDH1L1-210ENST00000472186 3157 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 RPL32P3-205ENST00000507287 1555 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 CTNND1-213ENST00000526357 5994 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 BTN2A1-207ENST00000541522 2845 ntTSL 2 BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 LMLN-201ENST00000330198 7043 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 C22orf23-203ENST00000403305 1517 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 DEPDC5-206ENST00000400249 5458 ntTSL 5 BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 NRP1-207ENST00000374875 5407 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 PISD-201ENST00000266095 2655 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 NT5C1B-201ENST00000304081 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 DNAJB13-205ENST00000543947 1779 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
NPIPA3F8WFD2 SERPINB6-203ENST00000380524 1495 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 190.5 ms