Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.4■□□□□ 0.86
DNMT3AQ9Y6K1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DNMT3AQ9Y6K1 CDV3P1-201ENST00000471403 739 ntBASIC20.4■□□□□ 0.86
DNMT3AQ9Y6K1 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.4■□□□□ 0.86
DNMT3AQ9Y6K1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
DNMT3AQ9Y6K1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.4■□□□□ 0.86
DNMT3AQ9Y6K1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DNMT3AQ9Y6K1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
DNMT3AQ9Y6K1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
DNMT3AQ9Y6K1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
DNMT3AQ9Y6K1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
DNMT3AQ9Y6K1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.39■□□□□ 0.86
DNMT3AQ9Y6K1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.39■□□□□ 0.85
DNMT3AQ9Y6K1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.39■□□□□ 0.85
DNMT3AQ9Y6K1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
DNMT3AQ9Y6K1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DNMT3AQ9Y6K1 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.39■□□□□ 0.85
DNMT3AQ9Y6K1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
DNMT3AQ9Y6K1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.39■□□□□ 0.85
DNMT3AQ9Y6K1 AC133552.2-202ENST00000575694 574 ntBASIC20.39■□□□□ 0.85
DNMT3AQ9Y6K1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
DNMT3AQ9Y6K1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
DNMT3AQ9Y6K1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
DNMT3AQ9Y6K1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
DNMT3AQ9Y6K1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
DNMT3AQ9Y6K1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.38■□□□□ 0.85
DNMT3AQ9Y6K1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DNMT3AQ9Y6K1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DNMT3AQ9Y6K1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DNMT3AQ9Y6K1 AC006970.2-201ENST00000450065 779 ntBASIC20.38■□□□□ 0.85
DNMT3AQ9Y6K1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.38■□□□□ 0.85
DNMT3AQ9Y6K1 FAM21FP-204ENST00000608637 956 ntBASIC20.38■□□□□ 0.85
DNMT3AQ9Y6K1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.38■□□□□ 0.85
DNMT3AQ9Y6K1 OR10C1-204ENST00000622521 1039 ntBASIC20.38■□□□□ 0.85
DNMT3AQ9Y6K1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DNMT3AQ9Y6K1 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DNMT3AQ9Y6K1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
DNMT3AQ9Y6K1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3AQ9Y6K1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3AQ9Y6K1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3AQ9Y6K1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3AQ9Y6K1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3AQ9Y6K1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3AQ9Y6K1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
DNMT3AQ9Y6K1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.37■□□□□ 0.85
DNMT3AQ9Y6K1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
DNMT3AQ9Y6K1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.37■□□□□ 0.85
DNMT3AQ9Y6K1 AC069236.1-201ENST00000604339 616 ntBASIC20.37■□□□□ 0.85
DNMT3AQ9Y6K1 AC008694.1-202ENST00000636953 945 ntBASIC20.37■□□□□ 0.85
DNMT3AQ9Y6K1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3AQ9Y6K1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.37■□□□□ 0.85
DNMT3AQ9Y6K1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3AQ9Y6K1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3AQ9Y6K1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
DNMT3AQ9Y6K1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
DNMT3AQ9Y6K1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
DNMT3AQ9Y6K1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DNMT3AQ9Y6K1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNMT3AQ9Y6K1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNMT3AQ9Y6K1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.36■□□□□ 0.85
DNMT3AQ9Y6K1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.36■□□□□ 0.85
DNMT3AQ9Y6K1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
DNMT3AQ9Y6K1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNMT3AQ9Y6K1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNMT3AQ9Y6K1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.36■□□□□ 0.85
DNMT3AQ9Y6K1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNMT3AQ9Y6K1 MIR663A-201ENST00000385250 93 ntBASIC20.36■□□□□ 0.85
DNMT3AQ9Y6K1 AL512625.2-201ENST00000417533 625 ntBASIC20.36■□□□□ 0.85
DNMT3AQ9Y6K1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNMT3AQ9Y6K1 NCF1B-203ENST00000435988 1254 ntBASIC20.36■□□□□ 0.85
DNMT3AQ9Y6K1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNMT3AQ9Y6K1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.36■□□□□ 0.85
DNMT3AQ9Y6K1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNMT3AQ9Y6K1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.36■□□□□ 0.85
DNMT3AQ9Y6K1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
DNMT3AQ9Y6K1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
DNMT3AQ9Y6K1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
DNMT3AQ9Y6K1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DNMT3AQ9Y6K1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DNMT3AQ9Y6K1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
DNMT3AQ9Y6K1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
DNMT3AQ9Y6K1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
DNMT3AQ9Y6K1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.35■□□□□ 0.85
DNMT3AQ9Y6K1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DNMT3AQ9Y6K1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.35■□□□□ 0.85
DNMT3AQ9Y6K1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.35■□□□□ 0.85
DNMT3AQ9Y6K1 AL121832.2-201ENST00000610979 668 ntBASIC20.35■□□□□ 0.85
DNMT3AQ9Y6K1 AL050303.2-201ENST00000619798 666 ntBASIC20.35■□□□□ 0.85
DNMT3AQ9Y6K1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
DNMT3AQ9Y6K1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DNMT3AQ9Y6K1 AC116050.2-201ENST00000612102 1779 ntBASIC20.35■□□□□ 0.85
DNMT3AQ9Y6K1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.35■□□□□ 0.85
DNMT3AQ9Y6K1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.35■□□□□ 0.85
DNMT3AQ9Y6K1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
DNMT3AQ9Y6K1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
DNMT3AQ9Y6K1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DNMT3AQ9Y6K1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
DNMT3AQ9Y6K1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.34■□□□□ 0.85
DNMT3AQ9Y6K1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DNMT3AQ9Y6K1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms