Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB1Q9Y5F3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB1Q9Y5F3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB1Q9Y5F3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB1Q9Y5F3 AL137060.1-201ENST00000618151 2648 ntBASIC20.79■□□□□ 0.92
PCDHB1Q9Y5F3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PCDHB1Q9Y5F3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB1Q9Y5F3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHB1Q9Y5F3 SLC7A5P2-201ENST00000553010 536 ntBASIC20.79■□□□□ 0.92
PCDHB1Q9Y5F3 DUX4L16-201ENST00000555130 1264 ntBASIC20.79■□□□□ 0.92
PCDHB1Q9Y5F3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHB1Q9Y5F3 UBE2DNL-204ENST00000602536 740 ntBASIC20.79■□□□□ 0.92
PCDHB1Q9Y5F3 AC005181.1-201ENST00000604782 1256 ntBASIC20.79■□□□□ 0.92
PCDHB1Q9Y5F3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB1Q9Y5F3 AC231657.2-201ENST00000624556 255 ntBASIC20.79■□□□□ 0.92
PCDHB1Q9Y5F3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB1Q9Y5F3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB1Q9Y5F3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB1Q9Y5F3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHB1Q9Y5F3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB1Q9Y5F3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.79■□□□□ 0.92
PCDHB1Q9Y5F3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PCDHB1Q9Y5F3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB1Q9Y5F3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB1Q9Y5F3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHB1Q9Y5F3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB1Q9Y5F3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB1Q9Y5F3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB1Q9Y5F3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.78■□□□□ 0.92
PCDHB1Q9Y5F3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHB1Q9Y5F3 AC007322.1-201ENST00000426983 750 ntBASIC20.78■□□□□ 0.92
PCDHB1Q9Y5F3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB1Q9Y5F3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB1Q9Y5F3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHB1Q9Y5F3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHB1Q9Y5F3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHB1Q9Y5F3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.78■□□□□ 0.92
PCDHB1Q9Y5F3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB1Q9Y5F3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHB1Q9Y5F3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHB1Q9Y5F3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PCDHB1Q9Y5F3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB1Q9Y5F3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB1Q9Y5F3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHB1Q9Y5F3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB1Q9Y5F3 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHB1Q9Y5F3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHB1Q9Y5F3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
PCDHB1Q9Y5F3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHB1Q9Y5F3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.77■□□□□ 0.92
PCDHB1Q9Y5F3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHB1Q9Y5F3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
PCDHB1Q9Y5F3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.77■□□□□ 0.92
PCDHB1Q9Y5F3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.77■□□□□ 0.92
PCDHB1Q9Y5F3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.77■□□□□ 0.92
PCDHB1Q9Y5F3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PCDHB1Q9Y5F3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHB1Q9Y5F3 AL049796.1-201ENST00000565336 1766 ntBASIC20.77■□□□□ 0.91
PCDHB1Q9Y5F3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCDHB1Q9Y5F3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB1Q9Y5F3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.76■□□□□ 0.91
PCDHB1Q9Y5F3 AC005229.4-201ENST00000610085 2198 ntBASIC20.76■□□□□ 0.91
PCDHB1Q9Y5F3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PCDHB1Q9Y5F3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB1Q9Y5F3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PCDHB1Q9Y5F3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB1Q9Y5F3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.76■□□□□ 0.91
PCDHB1Q9Y5F3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.76■□□□□ 0.91
PCDHB1Q9Y5F3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB1Q9Y5F3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.76■□□□□ 0.91
PCDHB1Q9Y5F3 MIR4651-201ENST00000582622 73 ntBASIC20.76■□□□□ 0.91
PCDHB1Q9Y5F3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.76■□□□□ 0.91
PCDHB1Q9Y5F3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB1Q9Y5F3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB1Q9Y5F3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHB1Q9Y5F3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB1Q9Y5F3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB1Q9Y5F3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHB1Q9Y5F3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB1Q9Y5F3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PCDHB1Q9Y5F3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB1Q9Y5F3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB1Q9Y5F3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB1Q9Y5F3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB1Q9Y5F3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB1Q9Y5F3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB1Q9Y5F3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB1Q9Y5F3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PCDHB1Q9Y5F3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB1Q9Y5F3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHB1Q9Y5F3 AC138907.5-202ENST00000569484 235 ntBASIC20.75■□□□□ 0.91
PCDHB1Q9Y5F3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB1Q9Y5F3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PCDHB1Q9Y5F3 AC008175.2-201ENST00000612840 297 ntBASIC20.75■□□□□ 0.91
PCDHB1Q9Y5F3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB1Q9Y5F3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB1Q9Y5F3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB1Q9Y5F3 AF106564.1-201ENST00000607058 2553 ntBASIC20.75■□□□□ 0.91
PCDHB1Q9Y5F3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PCDHB1Q9Y5F3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms