Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHTOPQ9Y3Y2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC14.88□□□□□ -0.03
CHTOPQ9Y3Y2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC14.88□□□□□ -0.03
CHTOPQ9Y3Y2 AL391005.1-201ENST00000623953 2435 ntBASIC14.88□□□□□ -0.03
CHTOPQ9Y3Y2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHTOPQ9Y3Y2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHTOPQ9Y3Y2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHTOPQ9Y3Y2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHTOPQ9Y3Y2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHTOPQ9Y3Y2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHTOPQ9Y3Y2 AC004687.1-201ENST00000579003 1625 ntBASIC14.88□□□□□ -0.03
CHTOPQ9Y3Y2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC14.88□□□□□ -0.03
CHTOPQ9Y3Y2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.88□□□□□ -0.03
CHTOPQ9Y3Y2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHTOPQ9Y3Y2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHTOPQ9Y3Y2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 REST-206ENST00000612429 1376 ntTSL 5 BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 REST-207ENST00000616975 1370 ntTSL 5 BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 SRP68-213ENST00000629930 165 ntTSL 5 BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CHTOPQ9Y3Y2 AC073314.1-201ENST00000568729 2216 ntBASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 AC026471.6-201ENST00000622954 1905 ntBASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 AF131216.4-201ENST00000638924 1588 ntBASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 AC022616.5-201ENST00000518796 181 ntBASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHTOPQ9Y3Y2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 DUX4L4-201ENST00000566884 1269 ntBASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 AL032819.2-201ENST00000624543 2162 ntBASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CHTOPQ9Y3Y2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHTOPQ9Y3Y2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CHTOPQ9Y3Y2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CHTOPQ9Y3Y2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHTOPQ9Y3Y2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CHTOPQ9Y3Y2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CHTOPQ9Y3Y2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CHTOPQ9Y3Y2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
CHTOPQ9Y3Y2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms