Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HCN3Q9P1Z3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
HCN3Q9P1Z3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
HCN3Q9P1Z3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HCN3Q9P1Z3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.77■□□□□ 0.76
HCN3Q9P1Z3 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.77■□□□□ 0.76
HCN3Q9P1Z3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
HCN3Q9P1Z3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.77■□□□□ 0.76
HCN3Q9P1Z3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.77■□□□□ 0.76
HCN3Q9P1Z3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.77■□□□□ 0.76
HCN3Q9P1Z3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
HCN3Q9P1Z3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
HCN3Q9P1Z3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HCN3Q9P1Z3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HCN3Q9P1Z3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
HCN3Q9P1Z3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
HCN3Q9P1Z3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HCN3Q9P1Z3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCN3Q9P1Z3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.76■□□□□ 0.75
HCN3Q9P1Z3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.76■□□□□ 0.75
HCN3Q9P1Z3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.76■□□□□ 0.75
HCN3Q9P1Z3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCN3Q9P1Z3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HCN3Q9P1Z3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HCN3Q9P1Z3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCN3Q9P1Z3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HCN3Q9P1Z3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.76■□□□□ 0.75
HCN3Q9P1Z3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCN3Q9P1Z3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.76■□□□□ 0.75
HCN3Q9P1Z3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.76■□□□□ 0.75
HCN3Q9P1Z3 AC026185.1-201ENST00000445748 174 ntBASIC19.76■□□□□ 0.75
HCN3Q9P1Z3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.76■□□□□ 0.75
HCN3Q9P1Z3 RAP2CP1-201ENST00000605103 478 ntBASIC19.76■□□□□ 0.75
HCN3Q9P1Z3 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.76■□□□□ 0.75
HCN3Q9P1Z3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
HCN3Q9P1Z3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HCN3Q9P1Z3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCN3Q9P1Z3 Z98882.1-201ENST00000622160 2253 ntBASIC19.76■□□□□ 0.75
HCN3Q9P1Z3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCN3Q9P1Z3 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.76■□□□□ 0.75
HCN3Q9P1Z3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HCN3Q9P1Z3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.75■□□□□ 0.75
HCN3Q9P1Z3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HCN3Q9P1Z3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HCN3Q9P1Z3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.75■□□□□ 0.75
HCN3Q9P1Z3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
HCN3Q9P1Z3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.75■□□□□ 0.75
HCN3Q9P1Z3 TERF1P5-201ENST00000477545 1207 ntBASIC19.75■□□□□ 0.75
HCN3Q9P1Z3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HCN3Q9P1Z3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.75■□□□□ 0.75
HCN3Q9P1Z3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
HCN3Q9P1Z3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.75■□□□□ 0.75
HCN3Q9P1Z3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HCN3Q9P1Z3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.75■□□□□ 0.75
HCN3Q9P1Z3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HCN3Q9P1Z3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HCN3Q9P1Z3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HCN3Q9P1Z3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HCN3Q9P1Z3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HCN3Q9P1Z3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HCN3Q9P1Z3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
HCN3Q9P1Z3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HCN3Q9P1Z3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.74■□□□□ 0.75
HCN3Q9P1Z3 AC007322.1-201ENST00000426983 750 ntBASIC19.74■□□□□ 0.75
HCN3Q9P1Z3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.74■□□□□ 0.75
HCN3Q9P1Z3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.74■□□□□ 0.75
HCN3Q9P1Z3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HCN3Q9P1Z3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.74■□□□□ 0.75
HCN3Q9P1Z3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.74■□□□□ 0.75
HCN3Q9P1Z3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.74■□□□□ 0.75
HCN3Q9P1Z3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.74■□□□□ 0.75
HCN3Q9P1Z3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
HCN3Q9P1Z3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HCN3Q9P1Z3 RBM17P2-201ENST00000616397 1405 ntBASIC19.74■□□□□ 0.75
HCN3Q9P1Z3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HCN3Q9P1Z3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.73■□□□□ 0.75
HCN3Q9P1Z3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HCN3Q9P1Z3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HCN3Q9P1Z3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.73■□□□□ 0.75
HCN3Q9P1Z3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HCN3Q9P1Z3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.73■□□□□ 0.75
HCN3Q9P1Z3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HCN3Q9P1Z3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HCN3Q9P1Z3 MIR663A-201ENST00000385250 93 ntBASIC19.73■□□□□ 0.75
HCN3Q9P1Z3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.73■□□□□ 0.75
HCN3Q9P1Z3 CNN2P6-201ENST00000439038 900 ntBASIC19.73■□□□□ 0.75
HCN3Q9P1Z3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.73■□□□□ 0.75
HCN3Q9P1Z3 AC231657.2-201ENST00000624556 255 ntBASIC19.73■□□□□ 0.75
HCN3Q9P1Z3 AC013268.1-206ENST00000638368 961 ntBASIC19.73■□□□□ 0.75
HCN3Q9P1Z3 AC112229.1-201ENST00000639295 961 ntBASIC19.73■□□□□ 0.75
HCN3Q9P1Z3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HCN3Q9P1Z3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HCN3Q9P1Z3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HCN3Q9P1Z3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
HCN3Q9P1Z3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HCN3Q9P1Z3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.72■□□□□ 0.75
HCN3Q9P1Z3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.72■□□□□ 0.75
HCN3Q9P1Z3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
HCN3Q9P1Z3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HCN3Q9P1Z3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms