Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 DUX4L16-201ENST00000555130 1264 ntBASIC25.38■■□□□ 1.65
ECHDC1Q9NTX5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC25.38■■□□□ 1.65
ECHDC1Q9NTX5 AL137784.2-201ENST00000607332 1000 ntBASIC25.38■■□□□ 1.65
ECHDC1Q9NTX5 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC25.38■■□□□ 1.65
ECHDC1Q9NTX5 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ECHDC1Q9NTX5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC25.37■■□□□ 1.65
ECHDC1Q9NTX5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC25.37■■□□□ 1.65
ECHDC1Q9NTX5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ECHDC1Q9NTX5 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ECHDC1Q9NTX5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC25.37■■□□□ 1.65
ECHDC1Q9NTX5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
ECHDC1Q9NTX5 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
ECHDC1Q9NTX5 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ECHDC1Q9NTX5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ECHDC1Q9NTX5 AC091799.1-201ENST00000422823 811 ntBASIC25.37■■□□□ 1.65
ECHDC1Q9NTX5 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ECHDC1Q9NTX5 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC25.37■■□□□ 1.65
ECHDC1Q9NTX5 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC25.37■■□□□ 1.65
ECHDC1Q9NTX5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
ECHDC1Q9NTX5 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC25.37■■□□□ 1.65
ECHDC1Q9NTX5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
ECHDC1Q9NTX5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
ECHDC1Q9NTX5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
ECHDC1Q9NTX5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ECHDC1Q9NTX5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ECHDC1Q9NTX5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ECHDC1Q9NTX5 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
ECHDC1Q9NTX5 AC004911.1-201ENST00000416316 871 ntBASIC25.36■■□□□ 1.65
ECHDC1Q9NTX5 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC25.36■■□□□ 1.65
ECHDC1Q9NTX5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ECHDC1Q9NTX5 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC25.36■■□□□ 1.65
ECHDC1Q9NTX5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ECHDC1Q9NTX5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC25.36■■□□□ 1.65
ECHDC1Q9NTX5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ECHDC1Q9NTX5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ECHDC1Q9NTX5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ECHDC1Q9NTX5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ECHDC1Q9NTX5 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ECHDC1Q9NTX5 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ECHDC1Q9NTX5 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC25.35■■□□□ 1.65
ECHDC1Q9NTX5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ECHDC1Q9NTX5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC25.35■■□□□ 1.65
ECHDC1Q9NTX5 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC25.35■■□□□ 1.65
ECHDC1Q9NTX5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC25.35■■□□□ 1.65
ECHDC1Q9NTX5 AC092666.2-201ENST00000613287 246 ntBASIC25.35■■□□□ 1.65
ECHDC1Q9NTX5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ECHDC1Q9NTX5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC25.34■■□□□ 1.65
ECHDC1Q9NTX5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ECHDC1Q9NTX5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
ECHDC1Q9NTX5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
ECHDC1Q9NTX5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
ECHDC1Q9NTX5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC25.34■■□□□ 1.65
ECHDC1Q9NTX5 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
ECHDC1Q9NTX5 CNN2P6-201ENST00000439038 900 ntBASIC25.34■■□□□ 1.65
ECHDC1Q9NTX5 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
ECHDC1Q9NTX5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC25.34■■□□□ 1.65
ECHDC1Q9NTX5 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ECHDC1Q9NTX5 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
ECHDC1Q9NTX5 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
ECHDC1Q9NTX5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC25.34■■□□□ 1.65
ECHDC1Q9NTX5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
ECHDC1Q9NTX5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
ECHDC1Q9NTX5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ECHDC1Q9NTX5 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC25.33■■□□□ 1.65
ECHDC1Q9NTX5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
ECHDC1Q9NTX5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC25.33■■□□□ 1.65
ECHDC1Q9NTX5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC25.33■■□□□ 1.65
ECHDC1Q9NTX5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
ECHDC1Q9NTX5 AC013268.1-206ENST00000638368 961 ntBASIC25.33■■□□□ 1.65
ECHDC1Q9NTX5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
ECHDC1Q9NTX5 AC112229.1-201ENST00000639295 961 ntBASIC25.33■■□□□ 1.65
ECHDC1Q9NTX5 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC25.32■■□□□ 1.64
ECHDC1Q9NTX5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
ECHDC1Q9NTX5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
ECHDC1Q9NTX5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
ECHDC1Q9NTX5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
ECHDC1Q9NTX5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ECHDC1Q9NTX5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC25.32■■□□□ 1.64
ECHDC1Q9NTX5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
ECHDC1Q9NTX5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC25.32■■□□□ 1.64
ECHDC1Q9NTX5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC25.32■■□□□ 1.64
ECHDC1Q9NTX5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
ECHDC1Q9NTX5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC25.32■■□□□ 1.64
ECHDC1Q9NTX5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC25.31■■□□□ 1.64
ECHDC1Q9NTX5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ECHDC1Q9NTX5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC25.31■■□□□ 1.64
ECHDC1Q9NTX5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC25.31■■□□□ 1.64
ECHDC1Q9NTX5 AC007322.4-201ENST00000509611 723 ntBASIC25.31■■□□□ 1.64
ECHDC1Q9NTX5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.31■■□□□ 1.64
ECHDC1Q9NTX5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC25.31■■□□□ 1.64
ECHDC1Q9NTX5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ECHDC1Q9NTX5 AC080038.1-201ENST00000611274 1154 ntBASIC25.31■■□□□ 1.64
ECHDC1Q9NTX5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
ECHDC1Q9NTX5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ECHDC1Q9NTX5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ECHDC1Q9NTX5 AC121338.2-201ENST00000622535 1744 ntBASIC25.31■■□□□ 1.64
ECHDC1Q9NTX5 PLK5-205ENST00000642079 1969 ntBASIC25.31■■□□□ 1.64
ECHDC1Q9NTX5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ECHDC1Q9NTX5 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC25.31■■□□□ 1.64
ECHDC1Q9NTX5 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms