Protein–RNA interactions for Protein: Q9HCF6

TRPM3, Transient receptor potential cation channel subfamily M member 3, humanhuman

Predicted RBP Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3Q9HCF6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TRPM3Q9HCF6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TRPM3Q9HCF6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC28.32■■■□□ 2.12
TRPM3Q9HCF6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC28.32■■■□□ 2.12
TRPM3Q9HCF6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
TRPM3Q9HCF6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TRPM3Q9HCF6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC28.31■■■□□ 2.12
TRPM3Q9HCF6 RPS2P55-201ENST00000397318 883 ntBASIC28.31■■■□□ 2.12
TRPM3Q9HCF6 MIR1224-201ENST00000408193 85 ntBASIC28.31■■■□□ 2.12
TRPM3Q9HCF6 AC133681.1-201ENST00000465482 601 ntBASIC28.31■■■□□ 2.12
TRPM3Q9HCF6 AC107956.1-201ENST00000494359 873 ntBASIC28.31■■■□□ 2.12
TRPM3Q9HCF6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
TRPM3Q9HCF6 MTDHP1-201ENST00000605323 784 ntBASIC28.31■■■□□ 2.12
TRPM3Q9HCF6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC28.31■■■□□ 2.12
TRPM3Q9HCF6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
TRPM3Q9HCF6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
TRPM3Q9HCF6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
TRPM3Q9HCF6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC28.31■■■□□ 2.12
TRPM3Q9HCF6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC28.31■■■□□ 2.12
TRPM3Q9HCF6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TRPM3Q9HCF6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TRPM3Q9HCF6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC28.3■■■□□ 2.12
TRPM3Q9HCF6 AC211429.1-201ENST00000415277 523 ntBASIC28.3■■■□□ 2.12
TRPM3Q9HCF6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC28.3■■■□□ 2.12
TRPM3Q9HCF6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC28.3■■■□□ 2.12
TRPM3Q9HCF6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
TRPM3Q9HCF6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC28.3■■■□□ 2.12
TRPM3Q9HCF6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC28.3■■■□□ 2.12
TRPM3Q9HCF6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
TRPM3Q9HCF6 HES2-205ENST00000487437 968 ntTSL 3 BASIC28.29■■■□□ 2.12
TRPM3Q9HCF6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
TRPM3Q9HCF6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC28.29■■■□□ 2.12
TRPM3Q9HCF6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC28.29■■■□□ 2.12
TRPM3Q9HCF6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
TRPM3Q9HCF6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
TRPM3Q9HCF6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
TRPM3Q9HCF6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
TRPM3Q9HCF6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC28.29■■■□□ 2.12
TRPM3Q9HCF6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC28.29■■■□□ 2.12
TRPM3Q9HCF6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
TRPM3Q9HCF6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
TRPM3Q9HCF6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
TRPM3Q9HCF6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
TRPM3Q9HCF6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TRPM3Q9HCF6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC28.28■■■□□ 2.12
TRPM3Q9HCF6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TRPM3Q9HCF6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
TRPM3Q9HCF6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TRPM3Q9HCF6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC28.28■■■□□ 2.12
TRPM3Q9HCF6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC28.28■■■□□ 2.12
TRPM3Q9HCF6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
TRPM3Q9HCF6 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC28.28■■■□□ 2.12
TRPM3Q9HCF6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
TRPM3Q9HCF6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TRPM3Q9HCF6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
TRPM3Q9HCF6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
TRPM3Q9HCF6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC28.27■■■□□ 2.12
TRPM3Q9HCF6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TRPM3Q9HCF6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TRPM3Q9HCF6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TRPM3Q9HCF6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TRPM3Q9HCF6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TRPM3Q9HCF6 AL355075.4-201ENST00000554988 638 ntBASIC28.27■■■□□ 2.12
TRPM3Q9HCF6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC28.27■■■□□ 2.12
TRPM3Q9HCF6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
TRPM3Q9HCF6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TRPM3Q9HCF6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.12
TRPM3Q9HCF6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.12
TRPM3Q9HCF6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
TRPM3Q9HCF6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TRPM3Q9HCF6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.11
TRPM3Q9HCF6 AC010542.4-201ENST00000563151 1910 ntBASIC28.26■■■□□ 2.11
TRPM3Q9HCF6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
TRPM3Q9HCF6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC28.26■■■□□ 2.11
TRPM3Q9HCF6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
TRPM3Q9HCF6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC28.25■■■□□ 2.11
TRPM3Q9HCF6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TRPM3Q9HCF6 AC092053.2-201ENST00000640557 1818 ntBASIC28.25■■■□□ 2.11
TRPM3Q9HCF6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC28.25■■■□□ 2.11
TRPM3Q9HCF6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
TRPM3Q9HCF6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TRPM3Q9HCF6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
TRPM3Q9HCF6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC28.25■■■□□ 2.11
TRPM3Q9HCF6 AL049637.2-201ENST00000641778 930 ntBASIC28.25■■■□□ 2.11
TRPM3Q9HCF6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TRPM3Q9HCF6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC28.25■■■□□ 2.11
TRPM3Q9HCF6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
TRPM3Q9HCF6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TRPM3Q9HCF6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TRPM3Q9HCF6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TRPM3Q9HCF6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TRPM3Q9HCF6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TRPM3Q9HCF6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TRPM3Q9HCF6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TRPM3Q9HCF6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC28.24■■■□□ 2.11
TRPM3Q9HCF6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TRPM3Q9HCF6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC28.24■■■□□ 2.11
TRPM3Q9HCF6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
TRPM3Q9HCF6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC28.24■■■□□ 2.11
TRPM3Q9HCF6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC28.24■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms