Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ATXN3LQ9H3M9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ATXN3LQ9H3M9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.85■■□□□ 1.09
ATXN3LQ9H3M9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ATXN3LQ9H3M9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.85■■□□□ 1.09
ATXN3LQ9H3M9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
ATXN3LQ9H3M9 AC097658.1-201ENST00000475555 843 ntBASIC21.85■■□□□ 1.09
ATXN3LQ9H3M9 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.85■■□□□ 1.09
ATXN3LQ9H3M9 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.85■■□□□ 1.09
ATXN3LQ9H3M9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
ATXN3LQ9H3M9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ATXN3LQ9H3M9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ATXN3LQ9H3M9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ATXN3LQ9H3M9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ATXN3LQ9H3M9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ATXN3LQ9H3M9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.84■■□□□ 1.09
ATXN3LQ9H3M9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
ATXN3LQ9H3M9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ATXN3LQ9H3M9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ATXN3LQ9H3M9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
ATXN3LQ9H3M9 AC245052.3-201ENST00000450182 901 ntBASIC21.84■■□□□ 1.09
ATXN3LQ9H3M9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.84■■□□□ 1.09
ATXN3LQ9H3M9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ATXN3LQ9H3M9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ATXN3LQ9H3M9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
ATXN3LQ9H3M9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.83■■□□□ 1.09
ATXN3LQ9H3M9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ATXN3LQ9H3M9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
ATXN3LQ9H3M9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.83■■□□□ 1.09
ATXN3LQ9H3M9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
ATXN3LQ9H3M9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ATXN3LQ9H3M9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
ATXN3LQ9H3M9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.83■■□□□ 1.09
ATXN3LQ9H3M9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ATXN3LQ9H3M9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.83■■□□□ 1.09
ATXN3LQ9H3M9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ATXN3LQ9H3M9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.83■■□□□ 1.09
ATXN3LQ9H3M9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ATXN3LQ9H3M9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ATXN3LQ9H3M9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
ATXN3LQ9H3M9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
ATXN3LQ9H3M9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATXN3LQ9H3M9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.82■■□□□ 1.08
ATXN3LQ9H3M9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
ATXN3LQ9H3M9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATXN3LQ9H3M9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATXN3LQ9H3M9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ATXN3LQ9H3M9 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.82■■□□□ 1.08
ATXN3LQ9H3M9 AC091799.1-201ENST00000422823 811 ntBASIC21.82■■□□□ 1.08
ATXN3LQ9H3M9 POU5F1P3-201ENST00000428824 1078 ntBASIC21.82■■□□□ 1.08
ATXN3LQ9H3M9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.82■■□□□ 1.08
ATXN3LQ9H3M9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.82■■□□□ 1.08
ATXN3LQ9H3M9 AC091874.3-201ENST00000512672 1195 ntBASIC21.82■■□□□ 1.08
ATXN3LQ9H3M9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.82■■□□□ 1.08
ATXN3LQ9H3M9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.82■■□□□ 1.08
ATXN3LQ9H3M9 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.82■■□□□ 1.08
ATXN3LQ9H3M9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATXN3LQ9H3M9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
ATXN3LQ9H3M9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.82■■□□□ 1.08
ATXN3LQ9H3M9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.82■■□□□ 1.08
ATXN3LQ9H3M9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATXN3LQ9H3M9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATXN3LQ9H3M9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.81■■□□□ 1.08
ATXN3LQ9H3M9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
ATXN3LQ9H3M9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATXN3LQ9H3M9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
ATXN3LQ9H3M9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
ATXN3LQ9H3M9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.81■■□□□ 1.08
ATXN3LQ9H3M9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.81■■□□□ 1.08
ATXN3LQ9H3M9 AC083880.1-201ENST00000608266 535 ntBASIC21.81■■□□□ 1.08
ATXN3LQ9H3M9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATXN3LQ9H3M9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATXN3LQ9H3M9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 DUSP5P2-201ENST00000426873 1033 ntBASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 CDV3P1-201ENST00000471403 739 ntBASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 MYC-209ENST00000641252 345 ntBASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 FBXW4P1-201ENST00000426721 2239 ntBASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.8■■□□□ 1.08
ATXN3LQ9H3M9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.79■■□□□ 1.08
ATXN3LQ9H3M9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms