Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.09■□□□□ 0.97
SEMA3CQ99985 MFSD11-216ENST00000590393 1141 ntBASIC21.09■□□□□ 0.97
SEMA3CQ99985 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.09■□□□□ 0.97
SEMA3CQ99985 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.09■□□□□ 0.97
SEMA3CQ99985 RBM17P2-201ENST00000616397 1405 ntBASIC21.09■□□□□ 0.97
SEMA3CQ99985 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
SEMA3CQ99985 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEMA3CQ99985 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SEMA3CQ99985 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEMA3CQ99985 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.08■□□□□ 0.97
SEMA3CQ99985 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEMA3CQ99985 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SEMA3CQ99985 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.08■□□□□ 0.97
SEMA3CQ99985 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.08■□□□□ 0.97
SEMA3CQ99985 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.08■□□□□ 0.97
SEMA3CQ99985 AC010536.3-201ENST00000620306 533 ntBASIC21.08■□□□□ 0.97
SEMA3CQ99985 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SEMA3CQ99985 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SEMA3CQ99985 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SEMA3CQ99985 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SEMA3CQ99985 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SEMA3CQ99985 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SEMA3CQ99985 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
SEMA3CQ99985 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.07■□□□□ 0.96
SEMA3CQ99985 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.07■□□□□ 0.96
SEMA3CQ99985 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SEMA3CQ99985 AC011767.1-201ENST00000617410 1153 ntBASIC21.07■□□□□ 0.96
SEMA3CQ99985 BID-214ENST00000617586 542 ntTSL 5 BASIC21.07■□□□□ 0.96
SEMA3CQ99985 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SEMA3CQ99985 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.07■□□□□ 0.96
SEMA3CQ99985 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SEMA3CQ99985 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
SEMA3CQ99985 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SEMA3CQ99985 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SEMA3CQ99985 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SEMA3CQ99985 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA3CQ99985 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.06■□□□□ 0.96
SEMA3CQ99985 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA3CQ99985 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA3CQ99985 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA3CQ99985 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA3CQ99985 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA3CQ99985 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.06■□□□□ 0.96
SEMA3CQ99985 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA3CQ99985 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SEMA3CQ99985 AC243732.1-201ENST00000612648 864 ntBASIC21.06■□□□□ 0.96
SEMA3CQ99985 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA3CQ99985 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.06■□□□□ 0.96
SEMA3CQ99985 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.06■□□□□ 0.96
SEMA3CQ99985 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.05■□□□□ 0.96
SEMA3CQ99985 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.05■□□□□ 0.96
SEMA3CQ99985 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.05■□□□□ 0.96
SEMA3CQ99985 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA3CQ99985 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
SEMA3CQ99985 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA3CQ99985 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA3CQ99985 AC004911.1-201ENST00000416316 871 ntBASIC21.05■□□□□ 0.96
SEMA3CQ99985 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.05■□□□□ 0.96
SEMA3CQ99985 TERF1P5-201ENST00000477545 1207 ntBASIC21.05■□□□□ 0.96
SEMA3CQ99985 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.05■□□□□ 0.96
SEMA3CQ99985 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.05■□□□□ 0.96
SEMA3CQ99985 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.05■□□□□ 0.96
SEMA3CQ99985 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.05■□□□□ 0.96
SEMA3CQ99985 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.05■□□□□ 0.96
SEMA3CQ99985 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.05■□□□□ 0.96
SEMA3CQ99985 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA3CQ99985 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.05■□□□□ 0.96
SEMA3CQ99985 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SEMA3CQ99985 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA3CQ99985 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SEMA3CQ99985 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA3CQ99985 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SEMA3CQ99985 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.04■□□□□ 0.96
SEMA3CQ99985 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SEMA3CQ99985 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.04■□□□□ 0.96
SEMA3CQ99985 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3CQ99985 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3CQ99985 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3CQ99985 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3CQ99985 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.04■□□□□ 0.96
SEMA3CQ99985 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3CQ99985 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.04■□□□□ 0.96
SEMA3CQ99985 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.04■□□□□ 0.96
SEMA3CQ99985 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.04■□□□□ 0.96
SEMA3CQ99985 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.04■□□□□ 0.96
SEMA3CQ99985 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3CQ99985 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.04■□□□□ 0.96
SEMA3CQ99985 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SEMA3CQ99985 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3CQ99985 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3CQ99985 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.04■□□□□ 0.96
SEMA3CQ99985 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3CQ99985 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SEMA3CQ99985 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3CQ99985 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
SEMA3CQ99985 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SEMA3CQ99985 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SEMA3CQ99985 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SEMA3CQ99985 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SEMA3CQ99985 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms