Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RPGRQ92834 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
RPGRQ92834 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
RPGRQ92834 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC25.76■■□□□ 1.71
RPGRQ92834 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC25.76■■□□□ 1.71
RPGRQ92834 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC25.76■■□□□ 1.71
RPGRQ92834 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC25.76■■□□□ 1.71
RPGRQ92834 CRK-204ENST00000574295 1391 ntTSL 5 BASIC25.76■■□□□ 1.71
RPGRQ92834 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
RPGRQ92834 STX5-203ENST00000394690 1568 ntTSL 5 BASIC25.76■■□□□ 1.71
RPGRQ92834 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC25.76■■□□□ 1.71
RPGRQ92834 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
RPGRQ92834 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC25.76■■□□□ 1.71
RPGRQ92834 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC25.76■■□□□ 1.71
RPGRQ92834 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
RPGRQ92834 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC25.75■■□□□ 1.71
RPGRQ92834 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
RPGRQ92834 CYP21A1P-202ENST00000354927 1481 ntBASIC25.75■■□□□ 1.71
RPGRQ92834 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
RPGRQ92834 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
RPGRQ92834 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC25.75■■□□□ 1.71
RPGRQ92834 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC25.75■■□□□ 1.71
RPGRQ92834 SLC29A4P2-201ENST00000504749 1089 ntBASIC25.75■■□□□ 1.71
RPGRQ92834 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC25.75■■□□□ 1.71
RPGRQ92834 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC25.75■■□□□ 1.71
RPGRQ92834 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC25.75■■□□□ 1.71
RPGRQ92834 SPIB-206ENST00000596074 847 ntTSL 2 BASIC25.75■■□□□ 1.71
RPGRQ92834 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC25.75■■□□□ 1.71
RPGRQ92834 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
RPGRQ92834 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RPGRQ92834 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RPGRQ92834 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC25.74■■□□□ 1.71
RPGRQ92834 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
RPGRQ92834 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RPGRQ92834 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RPGRQ92834 AC069544.1-201ENST00000609399 999 ntBASIC25.74■■□□□ 1.71
RPGRQ92834 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC25.74■■□□□ 1.71
RPGRQ92834 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RPGRQ92834 AC127496.7-201ENST00000625110 1798 ntBASIC25.74■■□□□ 1.71
RPGRQ92834 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
RPGRQ92834 FAM99A-202ENST00000538190 1989 ntBASIC25.73■■□□□ 1.71
RPGRQ92834 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RPGRQ92834 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC25.73■■□□□ 1.71
RPGRQ92834 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RPGRQ92834 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RPGRQ92834 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
RPGRQ92834 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RPGRQ92834 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
RPGRQ92834 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC25.73■■□□□ 1.71
RPGRQ92834 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC25.73■■□□□ 1.71
RPGRQ92834 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.73■■□□□ 1.71
RPGRQ92834 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.73■■□□□ 1.71
RPGRQ92834 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
RPGRQ92834 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RPGRQ92834 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC25.72■■□□□ 1.71
RPGRQ92834 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.72■■□□□ 1.71
RPGRQ92834 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC25.72■■□□□ 1.71
RPGRQ92834 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC25.72■■□□□ 1.71
RPGRQ92834 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RPGRQ92834 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RPGRQ92834 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RPGRQ92834 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC25.72■■□□□ 1.71
RPGRQ92834 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
RPGRQ92834 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC25.72■■□□□ 1.71
RPGRQ92834 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RPGRQ92834 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RPGRQ92834 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC25.72■■□□□ 1.71
RPGRQ92834 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC25.72■■□□□ 1.71
RPGRQ92834 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
RPGRQ92834 MIR4497-201ENST00000583208 89 ntBASIC25.72■■□□□ 1.71
RPGRQ92834 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC25.72■■□□□ 1.71
RPGRQ92834 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
RPGRQ92834 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
RPGRQ92834 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RPGRQ92834 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC25.72■■□□□ 1.71
RPGRQ92834 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
RPGRQ92834 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC25.71■■□□□ 1.71
RPGRQ92834 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC25.71■■□□□ 1.71
RPGRQ92834 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
RPGRQ92834 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC25.71■■□□□ 1.71
RPGRQ92834 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RPGRQ92834 AC105020.6-201ENST00000621523 1217 ntBASIC25.71■■□□□ 1.71
RPGRQ92834 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC25.71■■□□□ 1.71
RPGRQ92834 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.71■■□□□ 1.71
RPGRQ92834 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RPGRQ92834 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
RPGRQ92834 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RPGRQ92834 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
RPGRQ92834 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC25.7■■□□□ 1.71
RPGRQ92834 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC25.7■■□□□ 1.71
RPGRQ92834 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.7■■□□□ 1.71
RPGRQ92834 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.71
RPGRQ92834 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.71
RPGRQ92834 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
RPGRQ92834 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RPGRQ92834 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RPGRQ92834 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC25.7■■□□□ 1.7
RPGRQ92834 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC25.7■■□□□ 1.7
RPGRQ92834 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC25.7■■□□□ 1.7
RPGRQ92834 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms