Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FNDC9Q8TBE3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FNDC9Q8TBE3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FNDC9Q8TBE3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
FNDC9Q8TBE3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FNDC9Q8TBE3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
FNDC9Q8TBE3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
FNDC9Q8TBE3 HLA-L-209ENST00000420110 1011 ntBASIC18.71■□□□□ 0.59
FNDC9Q8TBE3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.71■□□□□ 0.59
FNDC9Q8TBE3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FNDC9Q8TBE3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.71■□□□□ 0.59
FNDC9Q8TBE3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.71■□□□□ 0.59
FNDC9Q8TBE3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.71■□□□□ 0.59
FNDC9Q8TBE3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.71■□□□□ 0.59
FNDC9Q8TBE3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.71■□□□□ 0.59
FNDC9Q8TBE3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FNDC9Q8TBE3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FNDC9Q8TBE3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
FNDC9Q8TBE3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.71■□□□□ 0.59
FNDC9Q8TBE3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.71■□□□□ 0.59
FNDC9Q8TBE3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FNDC9Q8TBE3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FNDC9Q8TBE3 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.71■□□□□ 0.58
FNDC9Q8TBE3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FNDC9Q8TBE3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.7■□□□□ 0.58
FNDC9Q8TBE3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.7■□□□□ 0.58
FNDC9Q8TBE3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FNDC9Q8TBE3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
FNDC9Q8TBE3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
FNDC9Q8TBE3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.7■□□□□ 0.58
FNDC9Q8TBE3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
FNDC9Q8TBE3 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.7■□□□□ 0.58
FNDC9Q8TBE3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.7■□□□□ 0.58
FNDC9Q8TBE3 AL050303.2-201ENST00000619798 666 ntBASIC18.7■□□□□ 0.58
FNDC9Q8TBE3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.7■□□□□ 0.58
FNDC9Q8TBE3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FNDC9Q8TBE3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FNDC9Q8TBE3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
FNDC9Q8TBE3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FNDC9Q8TBE3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.7■□□□□ 0.58
FNDC9Q8TBE3 AC007375.3-201ENST00000600936 2314 ntBASIC18.69■□□□□ 0.58
FNDC9Q8TBE3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FNDC9Q8TBE3 RBM17P2-201ENST00000616397 1405 ntBASIC18.69■□□□□ 0.58
FNDC9Q8TBE3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.69■□□□□ 0.58
FNDC9Q8TBE3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
FNDC9Q8TBE3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.69■□□□□ 0.58
FNDC9Q8TBE3 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FNDC9Q8TBE3 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
FNDC9Q8TBE3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FNDC9Q8TBE3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
FNDC9Q8TBE3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
FNDC9Q8TBE3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FNDC9Q8TBE3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
FNDC9Q8TBE3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
FNDC9Q8TBE3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FNDC9Q8TBE3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.68■□□□□ 0.58
FNDC9Q8TBE3 NCF1B-203ENST00000435988 1254 ntBASIC18.68■□□□□ 0.58
FNDC9Q8TBE3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.68■□□□□ 0.58
FNDC9Q8TBE3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
FNDC9Q8TBE3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FNDC9Q8TBE3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
FNDC9Q8TBE3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FNDC9Q8TBE3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.68■□□□□ 0.58
FNDC9Q8TBE3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FNDC9Q8TBE3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FNDC9Q8TBE3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
FNDC9Q8TBE3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC9Q8TBE3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC9Q8TBE3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC9Q8TBE3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC9Q8TBE3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC9Q8TBE3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.67■□□□□ 0.58
FNDC9Q8TBE3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.67■□□□□ 0.58
FNDC9Q8TBE3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC9Q8TBE3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
FNDC9Q8TBE3 FBXW4P1-201ENST00000426721 2239 ntBASIC18.67■□□□□ 0.58
FNDC9Q8TBE3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.67■□□□□ 0.58
FNDC9Q8TBE3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC9Q8TBE3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC9Q8TBE3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FNDC9Q8TBE3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.67■□□□□ 0.58
FNDC9Q8TBE3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.66■□□□□ 0.58
FNDC9Q8TBE3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FNDC9Q8TBE3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FNDC9Q8TBE3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
FNDC9Q8TBE3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FNDC9Q8TBE3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
FNDC9Q8TBE3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FNDC9Q8TBE3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FNDC9Q8TBE3 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.66■□□□□ 0.58
FNDC9Q8TBE3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.66■□□□□ 0.58
FNDC9Q8TBE3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.66■□□□□ 0.58
FNDC9Q8TBE3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FNDC9Q8TBE3 AC007322.4-201ENST00000509611 723 ntBASIC18.66■□□□□ 0.58
FNDC9Q8TBE3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FNDC9Q8TBE3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
FNDC9Q8TBE3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.66■□□□□ 0.58
FNDC9Q8TBE3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FNDC9Q8TBE3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
FNDC9Q8TBE3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms