Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC26.59■■□□□ 1.85
LINC00116Q8NCU8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
LINC00116Q8NCU8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
LINC00116Q8NCU8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
LINC00116Q8NCU8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
LINC00116Q8NCU8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
LINC00116Q8NCU8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.59■■□□□ 1.85
LINC00116Q8NCU8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
LINC00116Q8NCU8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
LINC00116Q8NCU8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
LINC00116Q8NCU8 RPS2P55-201ENST00000397318 883 ntBASIC26.58■■□□□ 1.85
LINC00116Q8NCU8 AC012618.2-201ENST00000428058 849 ntBASIC26.58■■□□□ 1.85
LINC00116Q8NCU8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC26.58■■□□□ 1.85
LINC00116Q8NCU8 AC107956.1-201ENST00000494359 873 ntBASIC26.58■■□□□ 1.85
LINC00116Q8NCU8 KRT18P21-201ENST00000515767 1272 ntBASIC26.58■■□□□ 1.85
LINC00116Q8NCU8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC26.58■■□□□ 1.85
LINC00116Q8NCU8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
LINC00116Q8NCU8 AC105020.6-201ENST00000621523 1217 ntBASIC26.58■■□□□ 1.85
LINC00116Q8NCU8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
LINC00116Q8NCU8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
LINC00116Q8NCU8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC26.58■■□□□ 1.85
LINC00116Q8NCU8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
LINC00116Q8NCU8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
LINC00116Q8NCU8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
LINC00116Q8NCU8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
LINC00116Q8NCU8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
LINC00116Q8NCU8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
LINC00116Q8NCU8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.84
LINC00116Q8NCU8 AC010542.4-201ENST00000563151 1910 ntBASIC26.57■■□□□ 1.84
LINC00116Q8NCU8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
LINC00116Q8NCU8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
LINC00116Q8NCU8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
LINC00116Q8NCU8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC26.57■■□□□ 1.84
LINC00116Q8NCU8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
LINC00116Q8NCU8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC26.57■■□□□ 1.84
LINC00116Q8NCU8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
LINC00116Q8NCU8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
LINC00116Q8NCU8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
LINC00116Q8NCU8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
LINC00116Q8NCU8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
LINC00116Q8NCU8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
LINC00116Q8NCU8 AC068473.5-201ENST00000616428 2072 ntBASIC26.56■■□□□ 1.84
LINC00116Q8NCU8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
LINC00116Q8NCU8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LINC00116Q8NCU8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
LINC00116Q8NCU8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
LINC00116Q8NCU8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC26.56■■□□□ 1.84
LINC00116Q8NCU8 MTDHP1-201ENST00000605323 784 ntBASIC26.56■■□□□ 1.84
LINC00116Q8NCU8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
LINC00116Q8NCU8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LINC00116Q8NCU8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.56■■□□□ 1.84
LINC00116Q8NCU8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC26.56■■□□□ 1.84
LINC00116Q8NCU8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.56■■□□□ 1.84
LINC00116Q8NCU8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
LINC00116Q8NCU8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
LINC00116Q8NCU8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC26.55■■□□□ 1.84
LINC00116Q8NCU8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
LINC00116Q8NCU8 TSPY15P-201ENST00000457163 923 ntBASIC26.55■■□□□ 1.84
LINC00116Q8NCU8 HES2-205ENST00000487437 968 ntTSL 3 BASIC26.55■■□□□ 1.84
LINC00116Q8NCU8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC26.55■■□□□ 1.84
LINC00116Q8NCU8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC26.55■■□□□ 1.84
LINC00116Q8NCU8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC26.55■■□□□ 1.84
LINC00116Q8NCU8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
LINC00116Q8NCU8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC26.55■■□□□ 1.84
LINC00116Q8NCU8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
LINC00116Q8NCU8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
LINC00116Q8NCU8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC26.55■■□□□ 1.84
LINC00116Q8NCU8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
LINC00116Q8NCU8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
LINC00116Q8NCU8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
LINC00116Q8NCU8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
LINC00116Q8NCU8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC26.54■■□□□ 1.84
LINC00116Q8NCU8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC26.54■■□□□ 1.84
LINC00116Q8NCU8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
LINC00116Q8NCU8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC26.54■■□□□ 1.84
LINC00116Q8NCU8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
LINC00116Q8NCU8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
LINC00116Q8NCU8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
LINC00116Q8NCU8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
LINC00116Q8NCU8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC26.53■■□□□ 1.84
LINC00116Q8NCU8 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
LINC00116Q8NCU8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
LINC00116Q8NCU8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.53■■□□□ 1.84
LINC00116Q8NCU8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LINC00116Q8NCU8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC26.53■■□□□ 1.84
LINC00116Q8NCU8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LINC00116Q8NCU8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC26.53■■□□□ 1.84
LINC00116Q8NCU8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
LINC00116Q8NCU8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC26.53■■□□□ 1.84
LINC00116Q8NCU8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC26.53■■□□□ 1.84
LINC00116Q8NCU8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
LINC00116Q8NCU8 AC124016.1-201ENST00000609552 612 ntBASIC26.53■■□□□ 1.84
LINC00116Q8NCU8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC26.53■■□□□ 1.84
LINC00116Q8NCU8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LINC00116Q8NCU8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
LINC00116Q8NCU8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
LINC00116Q8NCU8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
LINC00116Q8NCU8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC26.52■■□□□ 1.84
LINC00116Q8NCU8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
LINC00116Q8NCU8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms