Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PACS1Q6VY07 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PACS1Q6VY07 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PACS1Q6VY07 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.97■□□□□ 0.95
PACS1Q6VY07 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PACS1Q6VY07 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PACS1Q6VY07 AC079140.4-201ENST00000507448 529 ntBASIC20.97■□□□□ 0.95
PACS1Q6VY07 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.97■□□□□ 0.95
PACS1Q6VY07 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.97■□□□□ 0.95
PACS1Q6VY07 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.97■□□□□ 0.95
PACS1Q6VY07 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PACS1Q6VY07 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PACS1Q6VY07 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PACS1Q6VY07 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.96■□□□□ 0.95
PACS1Q6VY07 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PACS1Q6VY07 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PACS1Q6VY07 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PACS1Q6VY07 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.96■□□□□ 0.95
PACS1Q6VY07 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.96■□□□□ 0.95
PACS1Q6VY07 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PACS1Q6VY07 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PACS1Q6VY07 CCDC92B-201ENST00000575506 885 ntBASIC20.96■□□□□ 0.95
PACS1Q6VY07 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.96■□□□□ 0.95
PACS1Q6VY07 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PACS1Q6VY07 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
PACS1Q6VY07 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PACS1Q6VY07 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.96■□□□□ 0.95
PACS1Q6VY07 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PACS1Q6VY07 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
PACS1Q6VY07 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PACS1Q6VY07 KRT87P-202ENST00000534226 1464 ntBASIC20.95■□□□□ 0.94
PACS1Q6VY07 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PACS1Q6VY07 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PACS1Q6VY07 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PACS1Q6VY07 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PACS1Q6VY07 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PACS1Q6VY07 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PACS1Q6VY07 EEF1DP3-203ENST00000566025 782 ntBASIC20.95■□□□□ 0.94
PACS1Q6VY07 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.95■□□□□ 0.94
PACS1Q6VY07 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.95■□□□□ 0.94
PACS1Q6VY07 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PACS1Q6VY07 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PACS1Q6VY07 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PACS1Q6VY07 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PACS1Q6VY07 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PACS1Q6VY07 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PACS1Q6VY07 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
PACS1Q6VY07 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PACS1Q6VY07 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PACS1Q6VY07 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PACS1Q6VY07 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PACS1Q6VY07 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PACS1Q6VY07 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.94■□□□□ 0.94
PACS1Q6VY07 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PACS1Q6VY07 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PACS1Q6VY07 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PACS1Q6VY07 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PACS1Q6VY07 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PACS1Q6VY07 AC097381.1-201ENST00000429019 1296 ntBASIC20.94■□□□□ 0.94
PACS1Q6VY07 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PACS1Q6VY07 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PACS1Q6VY07 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PACS1Q6VY07 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PACS1Q6VY07 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PACS1Q6VY07 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PACS1Q6VY07 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PACS1Q6VY07 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PACS1Q6VY07 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.94■□□□□ 0.94
PACS1Q6VY07 AC092667.1-201ENST00000434301 2586 ntBASIC20.93■□□□□ 0.94
PACS1Q6VY07 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PACS1Q6VY07 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PACS1Q6VY07 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PACS1Q6VY07 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.93■□□□□ 0.94
PACS1Q6VY07 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PACS1Q6VY07 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PACS1Q6VY07 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PACS1Q6VY07 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.93■□□□□ 0.94
PACS1Q6VY07 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.93■□□□□ 0.94
PACS1Q6VY07 KRT18P14-201ENST00000534205 1250 ntBASIC20.93■□□□□ 0.94
PACS1Q6VY07 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PACS1Q6VY07 AC053503.5-201ENST00000601508 636 ntBASIC20.93■□□□□ 0.94
PACS1Q6VY07 MIR6821-201ENST00000617625 74 ntBASIC20.93■□□□□ 0.94
PACS1Q6VY07 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PACS1Q6VY07 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PACS1Q6VY07 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PACS1Q6VY07 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
PACS1Q6VY07 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PACS1Q6VY07 RNF165-205ENST00000588679 2904 ntBASIC20.93■□□□□ 0.94
PACS1Q6VY07 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PACS1Q6VY07 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PACS1Q6VY07 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PACS1Q6VY07 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.93■□□□□ 0.94
PACS1Q6VY07 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.92■□□□□ 0.94
PACS1Q6VY07 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PACS1Q6VY07 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PACS1Q6VY07 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PACS1Q6VY07 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PACS1Q6VY07 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PACS1Q6VY07 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.92■□□□□ 0.94
PACS1Q6VY07 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms