Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SLC27A1Q6PCB7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.57■■□□□ 1.2
SLC27A1Q6PCB7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC27A1Q6PCB7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC27A1Q6PCB7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC27A1Q6PCB7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC27A1Q6PCB7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.57■■□□□ 1.2
SLC27A1Q6PCB7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.57■■□□□ 1.2
SLC27A1Q6PCB7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SLC27A1Q6PCB7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.57■■□□□ 1.2
SLC27A1Q6PCB7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC27A1Q6PCB7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
SLC27A1Q6PCB7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC27A1Q6PCB7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC27A1Q6PCB7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
SLC27A1Q6PCB7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
SLC27A1Q6PCB7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SLC27A1Q6PCB7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SLC27A1Q6PCB7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.57■■□□□ 1.2
SLC27A1Q6PCB7 AC116050.2-201ENST00000612102 1779 ntBASIC22.56■■□□□ 1.2
SLC27A1Q6PCB7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC27A1Q6PCB7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SLC27A1Q6PCB7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SLC27A1Q6PCB7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.56■■□□□ 1.2
SLC27A1Q6PCB7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC22.56■■□□□ 1.2
SLC27A1Q6PCB7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
SLC27A1Q6PCB7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC22.56■■□□□ 1.2
SLC27A1Q6PCB7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.56■■□□□ 1.2
SLC27A1Q6PCB7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC27A1Q6PCB7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC27A1Q6PCB7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC27A1Q6PCB7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.55■■□□□ 1.2
SLC27A1Q6PCB7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SLC27A1Q6PCB7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC27A1Q6PCB7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SLC27A1Q6PCB7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.55■■□□□ 1.2
SLC27A1Q6PCB7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC27A1Q6PCB7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC22.55■■□□□ 1.2
SLC27A1Q6PCB7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SLC27A1Q6PCB7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC22.55■■□□□ 1.2
SLC27A1Q6PCB7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.55■■□□□ 1.2
SLC27A1Q6PCB7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC22.55■■□□□ 1.2
SLC27A1Q6PCB7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC27A1Q6PCB7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.55■■□□□ 1.2
SLC27A1Q6PCB7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.55■■□□□ 1.2
SLC27A1Q6PCB7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC27A1Q6PCB7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC27A1Q6PCB7 FBXW4P1-201ENST00000426721 2239 ntBASIC22.54■■□□□ 1.2
SLC27A1Q6PCB7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC27A1Q6PCB7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SLC27A1Q6PCB7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC27A1Q6PCB7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SLC27A1Q6PCB7 AL355472.2-201ENST00000422958 438 ntBASIC22.54■■□□□ 1.2
SLC27A1Q6PCB7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.54■■□□□ 1.2
SLC27A1Q6PCB7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.54■■□□□ 1.2
SLC27A1Q6PCB7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC27A1Q6PCB7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC22.54■■□□□ 1.2
SLC27A1Q6PCB7 CYP2T3P-201ENST00000601990 817 ntBASIC22.54■■□□□ 1.2
SLC27A1Q6PCB7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC22.54■■□□□ 1.2
SLC27A1Q6PCB7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
SLC27A1Q6PCB7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC27A1Q6PCB7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.54■■□□□ 1.2
SLC27A1Q6PCB7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC27A1Q6PCB7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 MCRIP2P1-201ENST00000394346 511 ntBASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 LSM12P1-201ENST00000411836 588 ntBASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 AC097658.1-201ENST00000475555 843 ntBASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 MYC-209ENST00000641252 345 ntBASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC27A1Q6PCB7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.52■■□□□ 1.2
SLC27A1Q6PCB7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.52■■□□□ 1.2
SLC27A1Q6PCB7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SLC27A1Q6PCB7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SLC27A1Q6PCB7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SLC27A1Q6PCB7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.52■■□□□ 1.2
SLC27A1Q6PCB7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.52■■□□□ 1.2
SLC27A1Q6PCB7 DUSP5P2-201ENST00000426873 1033 ntBASIC22.52■■□□□ 1.2
SLC27A1Q6PCB7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.52■■□□□ 1.2
SLC27A1Q6PCB7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SLC27A1Q6PCB7 AC091874.3-201ENST00000512672 1195 ntBASIC22.52■■□□□ 1.2
SLC27A1Q6PCB7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms